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Name : tktA (RD1_2982) Accession : YP_683188.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 2857039 - 2859084 bp Length : 2046 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : GTGGATCTCAAAGCACGCGCCGCTGCGCACCCGGACCACTGGTCCAAAGCCAATGCAATTCGCGCACTGGCCCTGGACGC CGTCGCCGCTGCGAATTCGGGCCACTCGGGCATGCCCATCGGGATGGCGGATGCAGCCACGGTTCTGTTCGAAAAACACC TGAATTTCGATCCTACCGCCCCGAACTGGCCCGATCGTGACAGGTTCATCCTGTCGGCTGGCCATGGTTCCATGCTGCTT TACGCGCTGCTGCACCTGACGGGCTACGAAGACATGACGCTGGAGCAGATCAAGAATTTCCGCCAGTGGGGCGCGATCAC GGCCGGCCATCCGGAATATGGCCATGCCACCGGCATCGAGACGACAACCGGGCCCTTGGGACAGGGCATCTCCAACGCCG TGGGCTTTGCCATGGCCGAAGAGATCCAGCGCGCGCACTATGGCAAGAAGGTCGTGGATCACTATACCTATGTCATCGCG GGGGACGGCTGCCTGATGGAAGGTGTGAGCCAGGAGGCGATCACCCTTGCCGGGCGCCATCAACTGTCCAAGCTGGTTGT GCTCTGGGACAACAACAACATCACCATCGACGGCCCCGTCAGCCTGTCGGACCGCACGGATCAGGTCGGACGTTTCGTTT CTGCCGGCTGGGATGTGATCGAAATTGACGGCCATGACCCCGTGGAAATCGACGCCGCCCTCACGCGCGCCAAGAAGAAC CAGAAACCGACGATGATTGCCTGCAAGACGCATATCGCGCTGGGGCACGCAGCGCAGGATACCTCGAAAGGGCACGGCGC GCTGACCAATGCAGAGCAGAACACCGCCGCCAAGGCCGCATGGGGCTGGACAACCGGCCCGTTTGAAGTGCCCGATGCCG TTCTGCAAAGCTGGCACGCCATCGGTGCGCGGGGCAAAGCCGCGCGCGAGGCGTGGGAAGCCCGCTTTGACAGCCTGCCC CGCGGCAAGCGCGAGACGTTCAACCGCGCCTATGCGCTGGAGGTGCCCAAAAAGCTGAGCGCGACCGTCAAGGCGTTTAA AAAGCAGATGTCAGAGGGCGCGCCCAAACTGGCCACCCGCGCAAGCTCCGAGAAAGTCTTGGAAGTCATCAATCCGATCA TGCCCGAAACCGTTGGTGGATCGGCTGACCTGACCGGGTCCAACAACACCAAGACCAGCGATCTCGGCGTCTTTGACACC GATAATCGCGGCGGGCGCTACGTTTACTGGGGCATTCGCGAACACGGTATGGCGGCGGCCATGAACGGCATGGCCCTGCA TGGCGGTTTGCGGCCCTATGGCGGTACGTTCATGTGTTTCACGGATTACGCACGCCCCGCCATGCGTCTGGCCGCGCTGA TGAAAATCCCGACGGTCTTTGTGATGACCCACGACAGCATCGGTCTGGGCGAGGACGGCCCCACCCACCAACCGGTGGAG CATCTGGCGATCAGCCGGGCGACCCCCAACACCTATGTCTTCCGGCCCGCCGATACGATTGAAACCGCAGAAAGCTGGGA GCTGGCCCTGTCGAGCAAAACCACGCCTTCGGTGCTCTCGCTGACACGGCAGGGCCTGCCGACAGTCCGCACCGAGCACA AGACCCGCAATATGGTCGCGCAAGGCGCTTATGTGCTGGCAGATGCGGTTGGCAAACGACAGGCGATCCTGATGGCGACG GGTTCGGAAGTATCACTGGCCATGGCAGCGCGCGATATTCTGCACGCCGAAGGGATCGGCACGCGGGTCGTGTCCATGCC CTGCTGGGAGCTCTTTGAAGAGCAGGACGAGGCCCTGCGCAAACGTGTCCTGCCCGGCGGCCCGGTCCGCGTGGCAATTG AAGCAGGCATCCGCATGGGCTGGGACCGCTGGCTCTTTGGCGAACGGGGCAAGCGCGAGAAATCAGGCTTCATCGGCATG CATGACTTCGGGGCCTCCGCGCCTGCGGATGTTCTGTTCAAGGAACTGGGCATCACCGCCGAGGCCGCAGCGCAGAAAGT GCGCGATCTTCTGGCGGGCAAATGGAAACCCGATACGCGCGTCTAG Protein sequence : MDLKARAAAHPDHWSKANAIRALALDAVAAANSGHSGMPIGMADAATVLFEKHLNFDPTAPNWPDRDRFILSAGHGSMLL YALLHLTGYEDMTLEQIKNFRQWGAITAGHPEYGHATGIETTTGPLGQGISNAVGFAMAEEIQRAHYGKKVVDHYTYVIA GDGCLMEGVSQEAITLAGRHQLSKLVVLWDNNNITIDGPVSLSDRTDQVGRFVSAGWDVIEIDGHDPVEIDAALTRAKKN QKPTMIACKTHIALGHAAQDTSKGHGALTNAEQNTAAKAAWGWTTGPFEVPDAVLQSWHAIGARGKAAREAWEARFDSLP RGKRETFNRAYALEVPKKLSATVKAFKKQMSEGAPKLATRASSEKVLEVINPIMPETVGGSADLTGSNNTKTSDLGVFDT DNRGGRYVYWGIREHGMAAAMNGMALHGGLRPYGGTFMCFTDYARPAMRLAALMKIPTVFVMTHDSIGLGEDGPTHQPVE HLAISRATPNTYVFRPADTIETAESWELALSSKTTPSVLSLTRQGLPTVRTEHKTRNMVAQGAYVLADAVGKRQAILMAT GSEVSLAMAARDILHAEGIGTRVVSMPCWELFEEQDEALRKRVLPGGPVRVAIEAGIRMGWDRWLFGERGKREKSGFIGM HDFGASAPADVLFKELGITAEAAAQKVRDLLAGKWKPDTRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-124 | 46 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-125 | 46 |
