Gene Information

Name : fliP (RD1_0265)
Accession : YP_680677.1
Strain : Roseobacter denitrificans OCh 114
Genome accession: NC_008209
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 259899 - 260636 bp
Length : 738 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
TTGAAAATGACCCGCATCACACTGCTGGCCGTTGTTCTGATCGGGTTATTCACCCCGTCCGTCAGTCTTGCCCAAGACCT
GTCAATCTCTCTTGGGGATGACGGCTCGCTCAGTGCGCGGACCATCCAACTGTTCATTCTGATTACCGTGCTGAGCCTTG
CGCCCGGCCTGGCAATCATGATTACCTGTTTTCCTTTCCTTGTCACAGTGCTTTCAATATTGCGCCAGGCAATCGGCTTG
CAGCAATCACCGCCAAACATGTTGATCGTCAGTCTGGCCTTATTCCTTACGTATTTCATAATGGAGCCTGTCTTTCAGGC
GGCATGGCAAAACGGGATTCAACCGTTAACTGATAACGCAATTGATGCAGAGACTGCGTTCGTGCGCACGCTGGAGCCGT
TCCGTATCTTCATGGCAGGCCGTCTCGATCCGGATACTTTCTTTGCGATGGCGGAGTTGAGGTCAGAAACTATTGATGCA
GCTCCCACGGCGGAGGCCCCTTTATCTGTTCTCGTCCCAAGCTTTCTGCTGTCCGAAATTTCAAGAGCTTTTCAGATCGG
GTTTTTGGTATTTTTGCCGTTCCTGATAATCGACCTCGTCGTCGCTGCCGTTCTTATGTCGATGGGTATGATGATGGTGC
CGCCGGTTATCGTGTCACTGCCATTTAAGTTGGCATTCTTTGTATTGGCCGACGGATGGAACCTGATTGCCGGAAGCCTC
GTTCAGAGTTATTTTTGA

Protein sequence : 
MKMTRITLLAVVLIGLFTPSVSLAQDLSISLGDDGSLSARTIQLFILITVLSLAPGLAIMITCFPFLVTVLSILRQAIGL
QQSPPNMLIVSLALFLTYFIMEPVFQAAWQNGIQPLTDNAIDAETAFVRTLEPFRIFMAGRLDPDTFFAMAELRSETIDA
APTAEAPLSVLVPSFLLSEISRAFQIGFLVFLPFLIIDLVVAAVLMSMGMMMVPPVIVSLPFKLAFFVLADGWNLIAGSL
VQSYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_680677.1 flagellar biosynthesis protein FliP VFG2494 Protein 3e-36 47
fliP YP_680677.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-34 46
fliP YP_680677.1 flagellar biosynthesis protein FliP VFG2016 Protein 5e-36 46
fliP YP_680677.1 flagellar biosynthesis protein FliP VFG1259 Protein 8e-36 45
fliP YP_680677.1 flagellar biosynthesis protein FliP VFG0044 Protein 5e-25 41