Gene Information

Name : glnA (RD1_2569)
Accession : YP_682812.1
Strain : Roseobacter denitrificans OCh 114
Genome accession: NC_008209
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 2457282 - 2458685 bp
Length : 1404 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAAAGAACTACTGAAGATGATTGCGGACGAAGGTGTTGAATACGTCGATATCCGCTTTACCGACCCCCGCGGCAA
GCTGCAGCACGTCACGGTCATCGCTGATGAGGTGGACGAAGACTTCCTCGAAGAAGGCTTCATGTTTGACGGTTCCTCGA
TTGCCGGTTGGAAGTCGATCGAAAACTCCGACATGAAACTGATGCCGGATGTGGAAAGCGCCTATGTCGACCCGTTCTAT
GCAGAAAAAACCGTGTGCCTGCATTGCTCGATCGTGGAGCCGGATACCGGCGAACCCTATGAGCGTGACCCACGCTCGAC
AGCGCAGAAAGCCGAAGCGTTTCTGAAATCATCGGGCATTGGTGATGTGTCCTACTGGGGCCCCGAGGCGGAATTCTTCC
TGTTTGACAACGTCAAATACTCCAATTCGATCAACAAGGTATCTTACGAAGTTGATGCGGTGGATGCATCGTGGAACACA
GATACGGATTATGAGATGGGCAACATGGGCCACCGCCCCGGCGTCAAGGGTGGCTATTTCCCGGTCAACCCGATTGACGA
ATCCCAGGACCTGCGTTCCGAAATGTTGTCGACGATGAAACGTCTGGGCATGAAAGTGGACAAGCACCATCACGAGGTTG
CGTCCTGTCAGCACGAGTTGGGCCTGATCTTTGGCAGCCTGACCAAACAGGCGGATGAGTTGCAGAAATACAAATATGTG
ATCCACAACGTGGCCCACGCCTATGGCAAATCCGCAACCTTCATGCCCAAGCCGATCTATGGCGATAACGGCACGGGCAT
GCACTGCAACATGTCGATCTGGAAAGATGGCAAGCCGCTCTTTGCGGGCGACAAATACGCGGACCTGAGCCAGGAAGCGC
TGTATTACATCGGCGGCATCCTAAAGCACGCCAAGGCGCTGAACGCCTTCACCAACCCGGCGACGAACAGCTACAAACGC
CTGATCCCGGGGTTTGAAGCGCCGGTACTGCGTGCCTATTCCGCCCGCAACCGGTCAGGCTGCGTGCGTATTCCATGGAC
CGAAAACCCGAAGGCCAAGCGCGTCGAGGCACGCTTCCCGGATCCGGCGGCGAACCCGTACCTGTGCTTTGCGGCACTGC
TGATGGCAGGGCTGGACGGTATCATGAACAAAATCGACCCCGGCGAGGCCATGGACAAAAACCTCTATGATCTGCCTGCT
GAGGAGTTGGCCGGGATCCCCACAGTCTGCGGATCGCTGCGCGAAGCAATTGAATCGCTTCAGGCGGACATGGACTTCCT
GCTGGCGGGTGACGTCTTTACCAAGGATCAGATCGAAGGATACATCGAGCTGAAAATGGAAGAGATCGAGACATACGAAC
ACACGCCGCACCCGGTCGAATTTGGCATGTATTACAGCTGCTAA

Protein sequence :
MSKELLKMIADEGVEYVDIRFTDPRGKLQHVTVIADEVDEDFLEEGFMFDGSSIAGWKSIENSDMKLMPDVESAYVDPFY
AEKTVCLHCSIVEPDTGEPYERDPRSTAQKAEAFLKSSGIGDVSYWGPEAEFFLFDNVKYSNSINKVSYEVDAVDASWNT
DTDYEMGNMGHRPGVKGGYFPVNPIDESQDLRSEMLSTMKRLGMKVDKHHHEVASCQHELGLIFGSLTKQADELQKYKYV
IHNVAHAYGKSATFMPKPIYGDNGTGMHCNMSIWKDGKPLFAGDKYADLSQEALYYIGGILKHAKALNAFTNPATNSYKR
LIPGFEAPVLRAYSARNRSGCVRIPWTENPKAKRVEARFPDPAANPYLCFAALLMAGLDGIMNKIDPGEAMDKNLYDLPA
EELAGIPTVCGSLREAIESLQADMDFLLAGDVFTKDQIEGYIELKMEEIETYEHTPHPVEFGMYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-105 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_682812.1 glutamine synthetase, type I VFG1399 Protein 9e-108 52