Gene Information

Name : fliQ (RD1_0256)
Accession : YP_680668.1
Strain : Roseobacter denitrificans OCh 114
Genome accession: NC_008209
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 254846 - 255115 bp
Length : 270 bp
Strand : +
Note : -

DNA sequence :

ATGGCCGATCAGATCATCTTTTTTGATACGCTTCGGCATGGGCTCTGGATCGCGGTATTGATCTCGATACCGGTGCTCAC
TGCGGCTTTGGTCACTGGTGTGTCCATTGGCCTGGTGCAGGCCCTGACGTCCATTCAGGAAATGACACTCACTTTCGTTC
CGAAACTCGCGGCCATCGTCCTCGTTTTCTGGATGTCGATGGGCTTCATGACACAAACACTGGTGTCATTTTTTCATGAA
CAGATAATCCCGCTGATTGTAGGAGGTTAA

Protein sequence :

MADQIIFFDTLRHGLWIAVLISIPVLTAALVTGVSIGLVQALTSIQEMTLTFVPKLAAIVLVFWMSMGFMTQTLVSFFHE
QIIPLIVGG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
ssaS	YP_216428.1	secretion system apparatus protein SsaS	Virulence	SPI-2	Protein	0.026	41
ssaS	NP_460385.1	type III secretion system apparatus protein	Virulence	SPI-2	Protein	0.026	41
ssaS	NP_456108.1	putative type III secretion protein	Virulence	SPI-2	Protein	0.025	41
ssaS	NP_805091.1	type III secretion protein	Virulence	SPI-2	Protein	0.025	41
ssaS	CAA68200.1	secretion system apparatus, SsaS	Virulence	SPI-2	Protein	0.018	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fliQ	YP_680668.1	flagellar biosynthetic protein FliQ	VFG0520	Protein	0.007	41