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Name : serS (RD1_2541) Accession : YP_682784.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2430595 - 2431887 bp Length : 1293 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCACGATATCCGCGCAATCCGAGAGAACCCGGCAGCCTTTGACGCAGCTTTGGCGCGACGTGGGGAGGCACCGATGTC GCAGGCGATCCTCGCGCTGGACACAGCACGGCGCGCCAAGATCAACGCGGCGGAAAACGCTCAGGCCGAACAGAACAAAG CTTCCAAAGAGGTCGGACAGGCCAAGGCACAGGGCGATGAAGCGACGTTTGAGAAACTGCGCGCGCTCGTCTCCGAAAAA AAGGCGCTGGTGGCTGAGATGCAGGCCGATGCCAAGGCGCTGGACGCAGAGTTGACGGAAAAACTGTCGTGGATTGCCAA CATCCCGGCCGATGACGTGCCCGACGGTGCCGACGAAGATGACAACGTCGAGGTGCGCCGCTGGGGGCATCTGCCCGATT TCGAGTTCACACCCAAGGAACACTACGAAATCGGTGGCGTTGCCGCTTCGATGGATTTTGACACGGCCGCCAAGACATCA GGTGCGCGTTTCGTGATGCTGAAGGGTGCGGTTGCCCGGATCCATCGTGCCTTGTCGCAATTCATGATCGACACCCATGT GGATCACAACGGGCTGACCGAAATCAACAGCCCTGTTCTGGTGCGTGACGATGCGATGTATGGCACGGACAAACTGCCGA AATTTGCCGAGGACAGCTACCAGACCACCAATGGCTGGTGGCTTGTGTCCACATCGGAAATCCCCCTGACCTATACGGTC GCTGGTGATATCCTTGACGCTGCCGCCCTGCCGATCCGGCTGACGGCGCATACGCTGTGTTTCCGCTCCGAAGCGGGCAG CGCGGGGCGCGACACGGCGGGTATGCTGCGCCAGCACCAGTTCGAAAAGGTGGAGATGGTTTCCATCACCGAACCGGACC AGTCCGAGGCGGAACAACAACGCATGCTGCGCTGTGCCGAGGATATTCTGGAACGTCTTGGCCTGCCCTATCGCACGGTA TTGCTTTGCACGGGCGACATGGGGTTCGGGGCGCGGCGCACCTTTGACATCGAAGCCTGGTTGCCCGGTCAGAACAATTA TCGCGAGATATCTTCGGTTTCGACGACCGGGGATTTTCAGGCGCGGCGCATGAATGCGCGCTACAAACCCGCCGATGGGG GCAAGCCGCAGTTCGTGCATACGCTGAACGGTTCGGGCCTTGCCGTGGGGCGCTGCCTGATTGCCGTGTTGGAAAACGGG CAGCAAGCAGATGGGTCCGTGGTTCTGCCGCCGGTCCTTGCGGGCTATCTCGGTGGCAAGACCGTGCTGAGCGCTGAGGG CACGCTGGTCTGA Protein sequence : MHDIRAIRENPAAFDAALARRGEAPMSQAILALDTARRAKINAAENAQAEQNKASKEVGQAKAQGDEATFEKLRALVSEK KALVAEMQADAKALDAELTEKLSWIANIPADDVPDGADEDDNVEVRRWGHLPDFEFTPKEHYEIGGVAASMDFDTAAKTS GARFVMLKGAVARIHRALSQFMIDTHVDHNGLTEINSPVLVRDDAMYGTDKLPKFAEDSYQTTNGWWLVSTSEIPLTYTV AGDILDAAALPIRLTAHTLCFRSEAGSAGRDTAGMLRQHQFEKVEMVSITEPDQSEAEQQRMLRCAEDILERLGLPYRTV LLCTGDMGFGARRTFDIEAWLPGQNNYREISSVSTTGDFQARRMNARYKPADGGKPQFVHTLNGSGLAVGRCLIAVLENG QQADGSVVLPPVLAGYLGGKTVLSAEGTLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-78 | 48 |
