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Name : RD1_2414 (RD1_2414) Accession : YP_682670.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 2303490 - 2304518 bp Length : 1029 bp Strand : - Note : - DNA sequence : GTGCTGCGCATCGGGGCGGTTTCCAAACGTTTTGGAACGGTCACTGTCCTGAAAGACTGTTCCTTGAATATTGCCGAAGG CGAGATCGTCACGCTGCTTGGTGCGTCGGGCTGTGGCAAGACCACGCTGCTGCGGTGCATCGCCGGGTTCTGGGACGCCG AGGAGGGCAAGATCGAGATCGACGGCCACGACGTCGGTGACCTGCCCGTCAATCGCCGCCCTGTCGGCGTGGTCTTCCAA AGCTACGCGCTTTTCCCGCATCTGACCGTAGCGCGCAACGTGGGGTACGGTCTGCGCATGCGAGGTGTGCCCCAAAGCGA GATCGACGCACGCGTGCGCGAGGCGCTGGAAACCGTGTCGCTGGCGGATTTTGCCGATCGCTACCCCGCACAGCTTTCTG GCGGCCAACAGCAGCGTGTGGCCGTTGCGCGGGTCCTGATCCTGCAGCCGCGTGTCCTGCTGCTTGATGAACCCTTCAGC GCGCTTGACGCGAAATTGCGCGGCGCCATGCAAGTGGAACTGCGCCAGTTGATCAAACGGCTGGGGCTCACGGCAATCTT CGTGACCCACGATCAGGAAGAAGCGCTGACCATGTCCGACCGTATCGCCGTCATGCGTGCGGGCCGGATTGAACAGGTCG CCGCGCCCGATACGGTGTTTGATCACCCGGCAACCGCCTATGTCGCGGACTTTATCGGCACATCGAATTTCTGGCAGGCG CAGGCCTCGGGCGGTCAGGTGGCTTTGCCGGACGGGCAGATCACGGACACAGATATTTCCGGGCCGGTGCAAGTCATGAC GCGGCCGCACAACCTGCGACTGGCCGCCGGGGACAAAGGCCCGTGGCGCGGACAGGTTTCCTTTCACAGGACCGTCGGTG CCTTGGTTGAATATCACGTCGAAATACCGGATGGGACCACGATACAGGTCGCTGCCATGCGCCAGGAACGCACGCGCCCG TGGCAAGCCGGAGAGGTCGTAAGCCTATCGGTGATCGATCCGTCCTATTGCGCGGTGTATCCGGTCTGA Protein sequence : MLRIGAVSKRFGTVTVLKDCSLNIAEGEIVTLLGASGCGKTTLLRCIAGFWDAEEGKIEIDGHDVGDLPVNRRPVGVVFQ SYALFPHLTVARNVGYGLRMRGVPQSEIDARVREALETVSLADFADRYPAQLSGGQQQRVAVARVLILQPRVLLLDEPFS ALDAKLRGAMQVELRQLIKRLGLTAIFVTHDQEEALTMSDRIAVMRAGRIEQVAAPDTVFDHPATAYVADFIGTSNFWQA QASGGQVALPDGQITDTDISGPVQVMTRPHNLRLAAGDKGPWRGQVSFHRTVGALVEYHVEIPDGTTIQVAAMRQERTRP WQAGEVVSLSVIDPSYCAVYPV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 4e-41 | 43 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-41 | 43 |
