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Name : dctM (RD1_2314) Accession : YP_682580.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Virulence Product : TRAP-type transporter DctM subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 2209057 - 2210346 bp Length : 1290 bp Strand : + Note : - DNA sequence : ATGCTGGTCTGGTTTCTTCCGCTGTTTTTGCTGTTCCTGCTGATCGGGTTGCCGGTATTTTTCGGCCTGCTCGCAGCGCC GGGGCTACTGCTGTGGCTCAACGGTCAGGAAAAAGACATCACGCTGCTGTATCGCAATGTTTATAACGGGATAGACAGCT TTCCCCTGATGGCGATCCCCTTCTTCATGCTGGCCGGAGAGTTGATGAACCGGGGCGGGATCACCATGCGTCTGGTTGAA TTCAGTCAGGCCATGATGGGGCATTTTCGCGGCGGGTTGGCGCATGTGAACATCCTGTCCTCCATGCTGTTTGCCGGGCT TTCGGGGTCTGCCGTGGCCGATATATCCGCACTCGGGTCGATGTTGATCCCGGCGATGGAAAAACAGGGCTATAGCCGCA AATTCGCCGCCGCGATCACGGCGGCCAGTTCCGTGATCGGGCCGATCATCCCGCCCTCGGGCATCATGATCATCTATGCC TATGTGATGGGCGAAAGCGTTGCCGCCCTGTTTCTGGCGGGCATTGTACCCGGAGTGATGGTGGGCCTTGGGTTGATGTT CATGGTCAAGATCATGGCTGACAAATATGATTTTCCCGTCGCCACCAAAAAACACACGTGGGGCGAACGCGGGCAGGCCA GCCTCAAGGCGTTTTTTCCGCTGATGACCCCGGTGATCATTCTCGGCGGTATTCTGGCAGGCGTTTTTACCCCGACCGAG GCGGCGGCGGTCGCCGTGGCCTATGCGCTTTTCATCGGCCTCTTCGTGATGCGCAGCCTCAAGCTGAGCGAGTTGCCGGA TGTGCTGGGCCGCGCGGGGCTCACATCGGCGGTTGTGCTGTTGCTGGTCGGTGCGGCGATGGCGTTCAAAACCGTTGTCA GCCTCAGCCACGCGCCCGAAGCCATGGCCGAATTCGTGCTGGCGCTCACGTCCAACCCGCTCATCCTGCTGTTTTTGATC AACCTTTTGCTCTTTGCGGTGGGGATGTTCTTGGATGCGGGGCCTGCGATTATCATCCTTGGGCCAATTCTGGGGCCAAT TTTCGTCAGCCTCGGCGTGGACCCGATCCATTTTGCCATCATCATGAGCGTCAACCTGACCGTCGGGCTGGCCACACCGC CGATGGGGCTGGTGCTCTTTGTCGCCTCCTCGGTTTCGGGCGAGCGGGTCGAGGCGATTTCAAAGGCGATCCTGCCGTTT CTGGCGGTCGAAATCGTGGTGATTTTCCTGATCACCTACATACCGGCCATTTCCATGACCATCCCGCGACTGACGGGCTT TGCCAACTGA Protein sequence : MLVWFLPLFLLFLLIGLPVFFGLLAAPGLLLWLNGQEKDITLLYRNVYNGIDSFPLMAIPFFMLAGELMNRGGITMRLVE FSQAMMGHFRGGLAHVNILSSMLFAGLSGSAVADISALGSMLIPAMEKQGYSRKFAAAITAASSVIGPIIPPSGIMIIYA YVMGESVAALFLAGIVPGVMVGLGLMFMVKIMADKYDFPVATKKHTWGERGQASLKAFFPLMTPVIILGGILAGVFTPTE AAAVAVAYALFIGLFVMRSLKLSELPDVLGRAGLTSAVVLLLVGAAMAFKTVVSLSHAPEAMAEFVLALTSNPLILLFLI NLLLFAVGMFLDAGPAIIILGPILGPIFVSLGVDPIHFAIIMSVNLTVGLATPPMGLVLFVASSVSGERVEAISKAILPF LAVEIVVIFLITYIPAISMTIPRLTGFAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 5e-47 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 5e-47 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 4e-47 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| dctM | YP_682580.1 | TRAP-type transporter DctM subunit | VFG1110 | Protein | 2e-47 | 41 |
