Gene Information

Name : RD1_1856 (RD1_1856)
Accession : YP_682153.1
Strain : Roseobacter denitrificans OCh 114
Genome accession: NC_008209
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 1777253 - 1778464 bp
Length : 1212 bp
Strand : +
Note : -

DNA sequence :
ATGTCACAGGCTCGTCTTCCCGTCACGGTTCTTTCCGGATTCTTGGGGGCTGGAAAAACCACGCTGTTGAACCGTGTTCT
GAACAATCGGGAAGGTCGGCGCGTTGCGGTCATCGTCAATGATATGTCCGAAGTGAACATCGACGCTGATCTGGTGCGGG
CGGATACACAGCTGAGCCGGACAGATGAGACGCTGGTCGAGATGTCGAACGGCTGTATTTGCTGCACGTTGCGCGATGAT
TTGCTGGACGAGGTGCGCCGTCTCGCCATTGAGGGTCGGTTTGACTACCTGCTCATCGAGTCCACCGGCATTTCGGAGCC
ATTGCCCGTGGCAGCGACATTCGATTTCCGGGATGAATTCGGCGATAGCCTGGCAGATGTGTCGCGACTGGATACGATGG
TCACGGTGGTGGATGCGGCGAATTTGCTGAATGATTACAGCAGCCATGATTTTCTGCGCGACCGCGGCGAGACGATGGGG
GAAGAGGATGACCGCACATTGGTTCACCTTCTTACCGACCAGATTGAATTCGCGGATGTCATTGTCCTGAACAAGGTCAC
GGATGCCGGTCCCGAACGTGTCGATGCTGCGCGCAAGATCATCCGCTCACTGAACGCGGATGCGAGGATCATCGAGACGG
ATCAATCCGATGTCCCGGCGGATGCGATCCTCGACACGGGCCTCTTTGATTTCGAAAAGGCCCATGAGCACCCGATGTGG
GCCAAAGAGCTGTATGGCTTTGCCGATCATGTTCCTGAAACGGAAGAATACGGTGTTGCCTCTTTTGTCTACCGGGCGCG
GCGTCCATTTGTTCCGGCGCAGATCCTCGCGGTTCTGAACGGTGATATGCCGGGCGTCATCCGGGCCAAGGGCCATTTCT
GGATCGCAACGCGCCCTGACTGGATTGCCGAGTTTTCACTGGCGGGGTCGTTATCTACGGTGAAACCGCTGGGGACGTGG
TGGGCCTCTGTGTCAAAGGAGAGCTGGCCTGCGCATGAAAGCGTGAAAAGCTATTTGCAGGCGCATTGGCAAGAACCTTG
GGGGGACCGCCGTCAGGAACTGGTGTTTATCGGGGCAGGGATCGACTGGCCTTCGCTGAAATCACGCCTTGATGGCTGTC
TTGTGCCTGCGTCGGTGGCCCCGGGGCCGGATGACTTGCCGGATTATCCCGACCCGTTCCCCATGTGGCGCCGTGCGGAA
CAAGCGGCATGA

Protein sequence :
MSQARLPVTVLSGFLGAGKTTLLNRVLNNREGRRVAVIVNDMSEVNIDADLVRADTQLSRTDETLVEMSNGCICCTLRDD
LLDEVRRLAIEGRFDYLLIESTGISEPLPVAATFDFRDEFGDSLADVSRLDTMVTVVDAANLLNDYSSHDFLRDRGETMG
EEDDRTLVHLLTDQIEFADVIVLNKVTDAGPERVDAARKIIRSLNADARIIETDQSDVPADAILDTGLFDFEKAHEHPMW
AKELYGFADHVPETEEYGVASFVYRARRPFVPAQILAVLNGDMPGVIRAKGHFWIATRPDWIAEFSLAGSLSTVKPLGTW
WASVSKESWPAHESVKSYLQAHWQEPWGDRRQELVFIGAGIDWPSLKSRLDGCLVPASVAPGPDDLPDYPDPFPMWRRAE
QAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 1e-71 50
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 7e-72 50