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Name : lpdA (RD1_1603) Accession : YP_681916.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 1547115 - 1548503 bp Length : 1389 bp Strand : - Note : - DNA sequence : ATGGCCAGCTACGACGTGATCATCATCGGCTCAGGCCCCGGCGGCTATGTCTGCGCCATTCGCTGCGCCCAACTGGGGCT GAAAGTGGCCTGCGTCGAGGGGCGCGACACGCTGGGCGGCACCTGCCTGAATGTCGGGTGCATTCCATCCAAAGCGCTCC TGCATGCCAGCCATATGCTGCACGAGGCAGAGCATAATTTCGCCGCCATGGGGCTGGTCGGCAAGAGCCCGTCGGTGGAT TGGAAAAAGATGATGTCCTACAAGGAAGACACCATCGGCCAGAACACCAAGGGCATCGAATTCCTGTTCAAAAAGAACAA GATCGACTGGCTGAAAGGTTGGGGGGCCATTCCTGAGGCCGGCAAAGTCAAGGTCGGGGATGAGGTGCATGAAGCCAAGC ACATCATCATCGCCTCTGGCTCCGAACCCGCATCCCTGCCCGGTGTCGAGGTCGATGAGAAAACCGTCGTGACCTCAACC GGCGCATTGGAACTGGGGAAGATCCCCAAGAAGATGGTGGTGATCGGTGCTGGCGTGATCGGGCTTGAACTGGGATCGGT CTATGCGCGCCTCGGTGCCGAGGTCACGGTGGTTGAATTTTTGGACGCGATCACCCCCGGCATGGACGCCGAAGTGCAGA AGACCTTCCAGAGAACGCTGAAAAAGCAGGGTCTTAAGTTCATCATGGGCGCTGCTGTACAAAAGACGGAGAGCCTCAAG ACCAAGGCGAAAGTACACTACAAGCTGCGCAAGGACGACAGCGAACATGTGCTGGATGCCGATGTTGTTCTGGTGGCCAC GGGCCGCAAACCCTTCACCGAAGGGCTGGGTCTGGACGCGCTGGGGGTCAAGATGTCCGCGCGGGGACAGATCGAGGTCA ACGCCCATTGGGAAACCAATGTGCCGGGCATCTACGCGATCGGCGACGTGATCGACGGCCCGATGCTCGCCCACAAGGCC GAGGATGAAGGGATGGCCGCCGCCGAACAGGTTGCGGGCAAACATGGGCACGTGAACTACGGCGTGATCCCCGGCGTCAT CTATACCCACCCCGAAGTGGCCAACGTCGGCATGACCGAGGAAAACCTGAAAGAGGCGGGCCATGCCTATAAGGTCGGCA AGTTCAGCTTCATGGGCAATGGCCGCGCGAAGGCGAATTTTGCCGGCGACGGTTTCGTCAAAATCATCGCCGACAAGGAC ACGGATCGCATCCTTGGTGCGCATATCATCGGCCCGGCGGCAGGTGATTTGATCCATGAAATCTGCGTTGCCATGGAATT CGGTGCCTCGGCAGAAGACCTCGCCATGACCTGCCATGCGCATCCGACCTACTCCGAAGCGGTCCGTGAGGCGGCACTGG CCTGCGGCGATGGTCCGATTCACATGTGA Protein sequence : MASYDVIIIGSGPGGYVCAIRCAQLGLKVACVEGRDTLGGTCLNVGCIPSKALLHASHMLHEAEHNFAAMGLVGKSPSVD WKKMMSYKEDTIGQNTKGIEFLFKKNKIDWLKGWGAIPEAGKVKVGDEVHEAKHIIIASGSEPASLPGVEVDEKTVVTST GALELGKIPKKMVVIGAGVIGLELGSVYARLGAEVTVVEFLDAITPGMDAEVQKTFQRTLKKQGLKFIMGAAVQKTESLK TKAKVHYKLRKDDSEHVLDADVVLVATGRKPFTEGLGLDALGVKMSARGQIEVNAHWETNVPGIYAIGDVIDGPMLAHKA EDEGMAAAEQVAGKHGHVNYGVIPGVIYTHPEVANVGMTEENLKEAGHAYKVGKFSFMGNGRAKANFAGDGFVKIIADKD TDRILGAHIIGPAAGDLIHEICVAMEFGASAEDLAMTCHAHPTYSEAVREAALACGDGPIHM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 4e-71 | 42 |
