Gene Information

Name : RD1_0157 (RD1_0157)
Accession : YP_680576.1
Strain : Roseobacter denitrificans OCh 114
Genome accession: NC_008209
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 156373 - 156639 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAGAAGCCGTTTCAGCGAAGAGCAGATCATTGGCATTTTGAAAGAGCACCAGGCCGGGCTTGGCGCGAAAGAGCT
GTGCCGCAAGCATGGGATCAGCGATGCGACTTTTTACAAGTGGCGATCCAAGTATGGCGGCATGGAAGTGTCCGACGCAC
GGCGGCTCAAGACGCTTGAAAGCGAGAACACCAAACTGAAGAAGATGCTGGCCGAGCAGATGATGGACGTGGCGACGCTG
AAAGAGATGCTCGGAAAAAACTTCTGA

Protein sequence :
MKRSRFSEEQIIGILKEHQAGLGAKELCRKHGISDATFYKWRSKYGGMEVSDARRLKTLESENTKLKKMLAEQMMDVATL
KEMLGKNF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 8e-22 60
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 4e-22 60
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 4e-22 60
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 8e-22 59
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 4e-17 49
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-17 49
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 1e-19 44