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Name : rplS (RD1_1305) Accession : YP_681636.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 1263527 - 1263910 bp Length : 384 bp Strand : - Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGGATCTGATTGCACAGATTGAAGCGGAACAAATCGCCGCGCTGGGAAAAGACATCCCCGACTTTCGCGCCGGTGACAC CGTCCGCGTCGGATTTAAAGTAACCGAGGGGACGCGCACCCGGGTTCAGAACTACGAAGGCGTTTGCATTGCACGCAACA ATGGCCACGGTATCGCCGGGTCGTTTACAGTGCGCAAAATCTCTTTCGGTGAAGGCGTTGAGCGGGTGTTTCCGCTGCAC TCCACCAACATCGAAAGCATCACAGTTGTGCGCCGTGGCCGCGTGCGCCGCGCCAAACTCTACTACCTGCGCAGCCGCCG CGGAAAATCCGCACGGATTGCGGAAAACACGAATTACAAGCCCAAGTCGGGCGCGAGCGTCTAA Protein sequence : MDLIAQIEAEQIAALGKDIPDFRAGDTVRVGFKVTEGTRTRVQNYEGVCIARNNGHGIAGSFTVRKISFGEGVERVFPLH STNIESITVVRRGRVRRAKLYYLRSRRGKSARIAENTNYKPKSGASV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 7e-26 | 63 |
| rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 6e-23 | 60 |
