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Name : RD1_1266 (RD1_1266) Accession : YP_681598.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1227785 - 1229365 bp Length : 1581 bp Strand : + Note : - DNA sequence : ATGAGTGCACTGCTGGATGTGAAGGACCTGGTGGTAAAATTCAGGCAGGACGGCGCGTTGACGACCGCCGTGAAGGGCGT GAGCTTTTCGGTTGAGCGGGGAGAAACCGTCGCCTTGGTGGGCGAATCCGGGTCGGGAAAATCCGTCTCGGCCTTATCCA CGGTGTCTCTGCTGGGGGATAGCGCCGAGGTGTCGGGCTCTGTCACCTATGACGGTCAGCAGATGATCGGGGCGAGCGAG ACGCTGTTGCGCAAGGTGCGGGGCAATGACATCAGCTTTATCTTTCAAGAGCCGATGACATCGCTTAACCCCTTGCACAC AATCGAAAAGCAACTGGGCGAAAGCCTTGCCTTGCATCAGGCGCTGAGCGGGGCCGCGGCACGGGCGCGTATTATCGAAC TGCTTGAACAGGTGGGTATCCATGACGCCGCAACACGCGTGACAAGCTATCCGCATCAGCTGTCGGGCGGGCAACGCCAG CGGGTCATGATCGCCATGGCGCTGGCCAACAAACCGGATGTGCTGATTGCGGATGAACCCACAACTGCGTTGGATGTGAC AATTCAGGCGCAGATTCTCGACCTGCTCAAGGATTTGAAGGACCGTCTGGGCATGGGTCTTCTGTTCATCACCCACGACC TTGGCATTGTGCGGCGCATTGCCGACAAGGTCTGCGTGATGCAACATGGCGAAATCGTCGAAAGCGGCAAAACCACCGAG ATATTTGCCAACCCGCAACACCCCTACACGCAAAAACTGTTGAGTGCCGAGCCGTCGGGCGCGCCGGTCTCTGTGCCGGA TCAGGCGACCATCGTGGCCCAGACCGACAACCTCAAGGTCTGGTTCCCGATCGAGGCGGGATTGCTGCGTCGCACCGTCG GGCACGTCAAAGCGGTCAATGATGCCAGCATGAGCGTGCGCGCGGGTGAAACCATCGGCGTGGTGGGCGAATCCGGGTCG GGTAAGACCACGATGGCGCTGGCTCTGATGCGGCTGATCGCGTCAGAGGGCAAGATCACCTTCATGGATCAGGATGTGCG CAAGTGGTCCACGCGTCAGCTGCGCAGCCTGCGCAAAGACATGCAGATCGTGTTTCAGGACCCTTTCGGGTCACTCAGCC CGCGGATGACCTGTATGCAGATCATTGCCGAAGGGCTGGGCATTCACAGCGTTGATCCGGACCGCGAACACCGGGACCTT GTGCATGATGTGATGGTGGAGGTGGGCCTCGATCCGGCCACGATGGACCGCTATCCGCATGAATTCTCCGGAGGACAGCG TCAGCGCATCGCAATCGCACGCGCGATGGTGTTGCGCCCCAAACTGCTGGTGCTGGATGAGCCGACATCGGCGCTGGATA TGACGGTACAGGTGCAGATCGTGGATTTGCTGCGGGATCTGCAAAAGAAATACGGGCTGGCCTACATTTTCATCAGCCAC GATTTGCGCGTCGTGCGCGCCATGTCGCACCGCGTGATGGTCATGAAACGCGGTGATGTGGTTGAGGCGGGCAGCGTCGA GCAGGTATTCGAAGCACCGCGCCACGAATACACGCGCAGCTTGCTGGCGGCCGCGACCTAG Protein sequence : MSALLDVKDLVVKFRQDGALTTAVKGVSFSVERGETVALVGESGSGKSVSALSTVSLLGDSAEVSGSVTYDGQQMIGASE TLLRKVRGNDISFIFQEPMTSLNPLHTIEKQLGESLALHQALSGAAARARIIELLEQVGIHDAATRVTSYPHQLSGGQRQ RVMIAMALANKPDVLIADEPTTALDVTIQAQILDLLKDLKDRLGMGLLFITHDLGIVRRIADKVCVMQHGEIVESGKTTE IFANPQHPYTQKLLSAEPSGAPVSVPDQATIVAQTDNLKVWFPIEAGLLRRTVGHVKAVNDASMSVRAGETIGVVGESGS GKTTMALALMRLIASEGKITFMDQDVRKWSTRQLRSLRKDMQIVFQDPFGSLSPRMTCMQIIAEGLGIHSVDPDREHRDL VHDVMVEVGLDPATMDRYPHEFSGGQRQRIAIARAMVLRPKLLVLDEPTSALDMTVQVQIVDLLRDLQKKYGLAYIFISH DLRVVRAMSHRVMVMKRGDVVEAGSVEQVFEAPRHEYTRSLLAAAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 4e-99 | 42 |
