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Name : RD1_1102 (RD1_1102) Accession : YP_681445.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1054098 - 1055873 bp Length : 1776 bp Strand : - Note : - DNA sequence : ATGACGACACCACTGCTGGATGTATGCAACCTGAGCATCGGTTTTGGTACTGCCGACCCGGTCGTGCGGGACGTGAGTTT CAGTGTCATGCCCGGTGAAACGCTCGCACTTGTCGGAGAAAGCGGGTCCGGCAAAACCATTTCCTGTCGCTCCGTGCTGC GCATTCTGCCCGAGGCGGCACAAATTCGCAGCGGCACGATCAATTTTGCATCCGCGAGCGGGCCGACCGTTGACCTGCTG GCGATCAAGGAACGCGCCATGCGGGCCATTCGCGGTGATCAGATTTCGATGATTTTTCAGGAGCCGATGCGCTCCCTCTC GCCGCTGCACCGGCTGGGCGATCAGGTCGCCGAAGTCTTGACGCTGCACCGCAACCTGAGCCGCGCGGAGGCGAAGAAAT CAGTGTTGGAAACATTCGAACGTGTTGGTTTTCCCGACCCGGCGCGGGTCTGGAAATCCTATCCGTTCGAGATGTCCGGC GGGATGCGCCAGCGCGCCATGATTGCGATGGCCATGGTCGCCAAGCCTGAGCTGTTGATCGCGGACGAGCCAACAACGGC CCTTGATGTGACCACACAGGCACAGGTCTTGGGGCTGATCAATGATTTGCAACGCGACACCGGCATGGCCGTGATACTGG TCACGCATGATTTGGGTGTCGTGGCAAATATGGCTGAATCCGTTGTGGTCATGAACAAGGGCCGGATCATGGAAAGTGGC CCCGCGGCGGCGGTTCTGGGCGCTCCTGCACATGGGTACACGAAAAAACTCTTCGCCGCCGCGCCCTCCATCCCGCAGGT TGCACATCCGGTTGAACGCACCAAAAGCGCAGATCACATCCTCGAACTGCGCAGCGTCTGCAAGACCTATACGATGCGCG CGGGCGGCTGGCGTGCGCCGCAAAGTATTACCGCCTGCCACCAGGTTAACCTGACACTGGAACGTGGCAAAACCCTCGCT GTTGTCGGGGAAAGCGGGTCGGGCAAGACAACCTGCGCCCGCATCGCCCTTGGGGCCGAAGCACCAGATGAAGGCGGCCA CGTCCTGTTTCGCGCCGAGGCAAACGCGGAGCCGCTGAAAATTCACGCGATGACGCCTGCGGAGCGGGTCAGATTCCAGA AACAGGCGCAGATGGTCTTTCAGGACCCTTATTCGTCGCTGTCGCCGCGCATGCGGATATCGCAAACGATGACGGAGCCG ATGGAAATTCACCGGATCGGCACCAAGGCTGAGCGGCGCGACAAGGCGGCAGAAATGCTGCGCTGGGTGGGGCTTGATCC ATCCATGCTGGTGCGCTTTCCGCATGCCTTTTCCGGGGGGCAGCGGCAGAGGCTGTCGATCGCGCGGGCGCTGACGCTGG ACCCGGTGTTACTGGTGTGTGATGAGCCGACCTCGGCGCTCGATGTCTCGGTCCAGGAACAGATCCTGACCCTGCTGGAG GACATTCGCGACCGTATGGGTCTGAGCTATCTGTTCATCAGTCACGATCTGGCCGTTGTCGCGCGCATCGCCGATGAGGT CGCGGTCATGCGTCAGGGTGTTGTGGTCGAACAGGCCGCCCCCGACATGCTCTTTTACAACCCGCGCCACCCCTATACGC GGGCTTTGATCGCGGCCCAGCCGACGCCCGATGTGAACCGTCCCATTGACCTTAATCTGGTATCGCAGGGTGCGGGCTCA CCAGCCAGCTGGCCCGATGAATTCCGCTTTGAGGGGGTCGCGGCCCCGGCGTTAACTGAACTCGCACCCGGTCATAAGGT ACGTTGTCATGTATAG Protein sequence : MTTPLLDVCNLSIGFGTADPVVRDVSFSVMPGETLALVGESGSGKTISCRSVLRILPEAAQIRSGTINFASASGPTVDLL AIKERAMRAIRGDQISMIFQEPMRSLSPLHRLGDQVAEVLTLHRNLSRAEAKKSVLETFERVGFPDPARVWKSYPFEMSG GMRQRAMIAMAMVAKPELLIADEPTTALDVTTQAQVLGLINDLQRDTGMAVILVTHDLGVVANMAESVVVMNKGRIMESG PAAAVLGAPAHGYTKKLFAAAPSIPQVAHPVERTKSADHILELRSVCKTYTMRAGGWRAPQSITACHQVNLTLERGKTLA VVGESGSGKTTCARIALGAEAPDEGGHVLFRAEANAEPLKIHAMTPAERVRFQKQAQMVFQDPYSSLSPRMRISQTMTEP MEIHRIGTKAERRDKAAEMLRWVGLDPSMLVRFPHAFSGGQRQRLSIARALTLDPVLLVCDEPTSALDVSVQEQILTLLE DIRDRMGLSYLFISHDLAVVARIADEVAVMRQGVVVEQAAPDMLFYNPRHPYTRALIAAQPTPDVNRPIDLNLVSQGAGS PASWPDEFRFEGVAAPALTELAPGHKVRCHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-100 | 41 |
