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Name : YPA_0385 (YPA_0385) Accession : YP_650298.1 Strain : Yersinia pestis Antiqua Genome accession: NC_008150 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 449658 - 450716 bp Length : 1059 bp Strand : + Note : - DNA sequence : GTGTGGATCACTATTGCACCGTTCGTTACAGTTGCCAGAGTAAAACGTGACGAGGCTAAGAAGATTGTCGCTGGTGGCGG TGATCCCAGCCAGAACAAACAACAGGAAAAACTAGCCCGACAAGGTGAAGCGACGAATACCTTTGAGGCTATCACCCGAG AGTGGTATCAACGGCGTTACGATAGGTGGTCTGAATCTTATCGTTTAGAAATGATGAGCACGTTTGAAAGTGACGTTTTT CCATATATCGGTTACCGGCCAATCAAAGAAATTAAACCGCTTGAGCTGATGGCCGTGCTGTCCAAGTTAGAAAAACGGGG TGCCACTGAGAAAATGCGTAAGGTTCGGCAGCGATGTGGTGAGGTTTGGAAATACGCCATCATCACAGGCCGAGCCGAAT ATAATCCCGCCCCTGACCTTGCCAGTGCTTTTGCTCCTCATAAACGCGAACACTATCCACATCTTACGATTAATGAAATC CCTGAATTTCTTTCCAGCCTTGCCAGTTATAGCGGCAGCATGTTGGTTAAGTTGGCTATGCGGTTGTTGATCCTCACCGG TACCCGCCCAGGTGAATTGCGGCAGGCCGAATGGGCAGAGTTTGATTTTGATAATGCCTTATGGGAGATCCCCGCGGTGC GAATGAAGATGCGTCGGCCACATATGGTGCCGCTTCCGGATCAAGCCATTACGATACTAAAGCAGATTCAACCTATCAGC GGGCGCTATCAGTTTGTGTTCCCTGGCAGAATACAGCACAGCAAGCCTATCAGTGAGATGACACTCAATGTACTAATCCG ACGTATCGGTTATGGCGGCAGAGCCACTGGACATGGTTTTCGCCACACAATGAGCACTATTTTGCATGAGCAAGGTTTCA ATACGGCCTGGATAGAAACACAACTGGCTCATGTCGATAAAAACAGTATTCGCGGTACTTATAATCACGCTCAATATCTT GATGGACGCCGTGAAATGCTTCAATGGTATGCCGACTATATGGATAGTCTGGAAAATGGCGAGAATGTGATTCATGGCAG ATTTGGGAAACGGGCATAG Protein sequence : MWITIAPFVTVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTFEAITREWYQRRYDRWSESYRLEMMSTFESDVF PYIGYRPIKEIKPLELMAVLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHKREHYPHLTINEI PEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEWAEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPIS GRYQFVFPGRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWIETQLAHVDKNSIRGTYNHAQYL DGRREMLQWYADYMDSLENGENVIHGRFGKRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 1e-104 | 64 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 1e-104 | 64 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 2e-104 | 64 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 2e-104 | 64 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 2e-104 | 64 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 2e-104 | 64 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 7e-104 | 64 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 9e-104 | 64 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 9e-104 | 64 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 6e-103 | 63 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 3e-98 | 60 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 3e-101 | 59 |
| intA | AAB00935.1 | integrase A | Not tested | vap locus | Protein | 2e-48 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPA_0385 | YP_650298.1 | integrase | VFG0783 | Protein | 9e-105 | 64 |
| YPA_0385 | YP_650298.1 | integrase | VFG0598 | Protein | 4e-104 | 64 |
