Gene Information

Name : YPA_2935 (YPA_2935)
Accession : YP_652842.1
Strain : Yersinia pestis Antiqua
Genome accession: NC_008150
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 3269447 - 3270376 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence :
ATGGTCACTTTTGAGACAGTTATGGAAATTAAAATCCTGCACAAGCAGGGAATGAGTAGCCGGGCGATTGCCAGAGAACT
GGGGATCTCCCGCAATACCGTTAAACGTTATTTGCAGGCAAAATCTGAGCCGCCAAAATATACGCCGCGACCTGCTGTTG
CTTCACTCCTGGATGAATACCGGGATTATATTCGTCAACGCATCGCCGATGCTCATCCTTACAAAATCCCGGCAACGGTA
ATCGCTCGCGAGATCAGAGACCAGGGATATCGTGGCGGAATGACCATTCTCAGGGCATTCATTCGTTCTCTCTCGGTTCC
TCAGGAGCAGGAGCCTGCCGTTCGGTTCGAAACTGAACCCGGACGACAGATGCAGGTTGACTGGGGCACTATGCGTAATG
GTCGCTCACCGCTTCACGTGTTCGTTGCTGTTCTCGGATACAGCCGAATGCTGTACATCGAATTCACTGACAATATGCGT
TATGACACGCTGGAGACCTGCCATCGTAATGCGTTCCGCTTCTTTGGTGGTGTGCCGCGCGAAGTGTTGTATGACAATAT
GAAAACTGTGGTTCTGCAACGTGACGCATATCAGACCGGTCAGCACCGGTTCCATCCTTCGCTGTGGCAGTTCGGCAAGG
AGATGGGCTTCTCTCCCCGACTGTGTCGCCCCTTCAGGGCACAGACTAAAGGTAAGGTGGAACGGATGGTGCAGTACACC
CGTAACAGTTTTTACATCCCACTAATGACTCGCCTGCGCCCGATGGGGATCACTGTCGATGTTGAAACAGCCAACCGCCA
CGGTCTGCGCTGGCTGCACGATGTCGCTAACCAACGAAAGCATGAAACAATCCAGGCCCGTCCCTGCGATCGCTGGCTCG
AAGACCACCAGTCCATGCTGGCACTGCCTCCGGGAGAAAAAAGAGTATGA

Protein sequence :
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATV
IAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMR
YDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT
RNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEDHQSMLALPPGEKRV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api83 CAF28557.1 transposase Not tested YAPI Protein 1e-146 99
s0035 CAD33773.1 ORF A protein Not tested PAI I 536 Protein 9e-147 99
y1094 CAD42088.1 OrfA protein of IS100 transposase Not tested PAI II 536 Protein 9e-147 99
y1093 YP_002346890.1 transposase for insertion sequence IS100 Not tested HPI Protein 2e-146 99
orfA CAE85182.1 OrfA protein, transposase, IS100 Not tested PAI V 536 Protein 9e-147 99
y2411 NP_669718.1 transposase Not tested HPI Protein 2e-146 99
y1094 CAC43410.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 9e-147 99
YPTB1585 YP_070113.1 transposase Not tested HPI Protein 2e-146 99
unnamed CAA21403.1 - Not tested HPI Protein 2e-146 99
y1093 CAD33720.1 ORF A protein Not tested PAI I 536 Protein 2e-146 99
unnamed CAB46599.1 IS100 transposase Not tested HPI Protein 1e-146 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPA_2935 YP_652842.1 putative transposase VFG1626 Protein 5e-147 99
YPA_2935 YP_652842.1 putative transposase VFG1607 Protein 5e-147 99
YPA_2935 YP_652842.1 putative transposase VFG1461 Protein 1e-146 99
YPA_2935 YP_652842.1 putative transposase VFG1514 Protein 5e-147 99