Gene Information

Name : YPA_2789 (YPA_2789)
Accession : YP_652696.1
Strain : Yersinia pestis Antiqua
Genome accession: NC_008150
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 3108047 - 3110611 bp
Length : 2565 bp
Strand : -
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
ATGAAAAATAACGATAAACTCGACTCCCACACCCCGATGATGCAGCAGTATCTTCGGTTAAAAGCCCAGCATCCTGAAAT
ACTCCTGTTCTATCGAATGGGGGATTTTTATGAACTGTTCTATAGTGATGCCAAGCGAGCCTCACAACTGTTGGATATCT
CACTGACTAAACGTGGTGCTTCAGCCGGTGAACCCATACCGATGGCAGGCGTCCCCTATCATTCGATAGAAAACTATCTG
GCTAAGCTAGTGCAATTAGGTGAGTCAGCCGCCATCTGTGAGCAAATTGGTGATCCAGCCACCAGCAAAGGGCCAGTTGA
ACGGAAGGTTGTCCGTATCGTTACACCGGGCACAATCAGCGATGAAGCGCTGCTACAAGAGCGGCAAGATAACTTACTGG
CGGCTATCTGGCAGGATGCCAAAGGGTTTGGGTATGCCACTCTGGATATCAGCTCTGGCCGCTTCCGGGTTGCAGAACCC
GCCGATCTTGAAACGATGGCTGCCGAGTTACAACGCACCAATCCTGCCGAGTTACTGTATCCGGAAAACTTCGAGCCTAT
GTCGTTGATCGAGCATCGACATGGCTTACGCCGCCGGCCTTTATGGGAGTTTGAGCTGGATACCGCCAAACAACAGCTTA
ATCTGCAATTCGGGACCCGTGATTTAATTGGTTTCGGCGTTGAGCAAGCCCATCTGGCACTGCGGGCGGCGGGCTGCCTG
CTGCAATATGTCAAAGATACCCAACGCACATCCCTGCCGCATATCCGTGGCCTGACCATGGAGCGCCAGCAAGATGGCAT
CATTATGGATGCTGCTACCCGTCGTAATCTCGAATTGACGCAGAACCTATCCGGTGGCAGTGAAAATACGCTGGCAGCCA
TCCTCGATTGCAGCGTGACGCCAATGGGTAGCCGGATGCTAAAACGCTGGTTACATATGCCAATCCGCGATATTCGCGTG
CTCACGGATCGGCAACAAGCCATTGGTGGCCTACAAGATATCGCCGCCGAGTTACAAACCCCCTTGAGACAAGTGGGCGA
TTTAGAACGTATTTTGGCACGCTTAGCTCTGCGAACTGCCCGTCCACGCGATTTGGCCAGAATGCGTCATGCTTTCCAGC
AACTGCCAGAAATCCACCGTTTATTGCAACCTATTGATGTTCCTCATGTACAGAACTTGTTATCACAGGTGGGCCAATTC
GACGAATTGCAAGACTTATTGGAGCGGGCCATTGTCGAGACGCCACCAGTATTAGTCCGCGATGGCGGCGTTATTGCATC
AGGTTATAACGCTGAGTTAGATGAATGGCGGGCGCTGGCCGATGGTGCAACCGATTATCTGGATCGGTTGGAAATCCGTG
AGCGGGAGAAGTTAGGGCTGGACACACTAAAAGTGGGCTTTAATGGTGTACATGGCTATTACATTCAGGTTAGCCGTGGT
CAGAGCCATCTGGTGCCTATTCATTATGTCCGTCGGCAAACACTGAAAAATGCCGAGCGCTACATTATTCCGGAGCTGAA
AGAGTACGAAGATAAGGTTCTGACCTCAAAAGGTAAGGCACTGGCAATTGAGAAAGGGTTGTACGAAGAAATTTTCGATT
TGCTGCTGCCGCATCTGCCAGAATTACAACTCAGTGCTAATGCACTGGCTGAATTAGATGTACTGGCTAATCTGGCGGAA
AGAGCTGAAACACTCAACTACTCTTGCCCAACCCTGAGCGATAAGCCGGGGATTAAGATTATGGGTGGCCGTCACCCGGT
TGTGGAACAGGTCCTCAAAGAACCCTTTATTTCTAACCCGTTGACGTTATCTCCTCAGCGACGGATGTTGATCATTACTG
GGCCGAACATGGGCGGCAAAAGTACCTATATGCGCCAAACGGCGCTGATTGTGCTCTTGGCACACCTGGGAAGCTATGTC
CCTGCGGATCAGGCAACCATCGGGCCTATTGACCGCATATTTACCCGCGTCGGTGCCGCTGACGATCTGGCCTCTGGTCG
TTCGACCTTTATGGTGGAAATGACCGAGACCGCGAATATTCTGCATAACGCCACCGAACAAAGCCTGGTATTGATGGATG
AGATTGGCCGTGGCACATCCACCTATGATGGTTTGTCATTGGCCTGGGCTTGTGCAGAAAATCTGGCCAGCCGTATCAAA
GCAATGACGCTATTTGCGACGCATTACTTTGAATTAACGACATTGCCAGAAAAAATGGAAGGTGTGGTAAATGTTCATCT
TGATGCATTGGAGCACGGCGAAACCATCGCGTTTATGCACAGTGTACAAGAGGGTGCAGCCAGTAAAAGTTATGGCCTGG
CAGTAGCCGCACTGGCTGGTGTGCCACGCGATGTCATTAAGCGAGCACGACAAAAACTGAAAGAGCTGGAATCACTCTCT
AATAACGCCGCCGCCAGTACGATTGATGGCTCACAAATGACGTTGTTAAATGAAGAAATCCCTCCCGCAGTGGAAGCGCT
GGAAGCGCTGGAAGCGCTGGATCCGGATTCATTGTCACCGCGTCAGGCACTGGAGTGGATCTATCGCTTGAAGAACATGG
TGTAA

Protein sequence :
MKNNDKLDSHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYSDAKRASQLLDISLTKRGASAGEPIPMAGVPYHSIENYL
AKLVQLGESAAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDAKGFGYATLDISSGRFRVAEP
ADLETMAAELQRTNPAELLYPENFEPMSLIEHRHGLRRRPLWEFELDTAKQQLNLQFGTRDLIGFGVEQAHLALRAAGCL
LQYVKDTQRTSLPHIRGLTMERQQDGIIMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRV
LTDRQQAIGGLQDIAAELQTPLRQVGDLERILARLALRTARPRDLARMRHAFQQLPEIHRLLQPIDVPHVQNLLSQVGQF
DELQDLLERAIVETPPVLVRDGGVIASGYNAELDEWRALADGATDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVSRG
QSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALAIEKGLYEEIFDLLLPHLPELQLSANALAELDVLANLAE
RAETLNYSCPTLSDKPGIKIMGGRHPVVEQVLKEPFISNPLTLSPQRRMLIITGPNMGGKSTYMRQTALIVLLAHLGSYV
PADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLVLMDEIGRGTSTYDGLSLAWACAENLASRIK
AMTLFATHYFELTTLPEKMEGVVNVHLDALEHGETIAFMHSVQEGAASKSYGLAVAALAGVPRDVIKRARQKLKELESLS
NNAAASTIDGSQMTLLNEEIPPAVEALEALEALDPDSLSPRQALEWIYRLKNMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPA_2789 YP_652696.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 84