Gene Information

Name : YPA_1293 (YPA_1293)
Accession : YP_651205.1
Strain : Yersinia pestis Antiqua
Genome accession: NC_008150
Putative virulence/resistance : Virulence
Product : putative signal transducer
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1450028 - 1451416 bp
Length : 1389 bp
Strand : +
Note : -

DNA sequence :
ATGCGCAATTGCTCTCACATCATGGACGTTATCAGGCGCTGTGGCAGGCGCAAATGGCCGCGCGCGTGTGGCGCGACGAC
GGGGTTTCCGCGTCTGGAGAGTGGGTGCATGAGTGATGTTCAGTCGAATGTGAAACCGCTGACGTTGACGACCGGGCGGG
TGATTTTTGCTATTGCCGGCGTCTATGTGACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTG
CGCGCTGCTGGCGGTTCGCTGGCGCTTGCCGGTGCGACAACCCTGTTTATGCTGCCCTGGGCGCTGAAGTTTATTTGGGC
GCCGTGGATCGAGCGCTGGCGGCTTCCGCCCGGTAGCCAGGAACGCCGTTCCCGCATGTTAATCCTGCGTGGTCAGGTCG
CGCTAGCGGCGATCCTGACTATTGCCGCAGCGATTGGCTGGTTTGGGCGAGAAGGGGGATTCCCCGATACGCAAATCGTC
GCGTTATTTGTTCTGTTTATGGTGGCAGGCACGGTCGCCTCCACCATTGATATCGCCAGCGACGGCTTTTGCGTCGATCA
ACTGACCCGCACGGGTTACGGCTGGGGAAACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGATGTGCGGCGGCGGGG
TGTTCCTGATGCTGTCGGCGGCATCCGGCTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATTATGGCGCTGTCACTC
CCGCTGTGGCGCATTACGGAGCCGACGCGAACAGCGACTATCCCGCATGTTCCGGCGTTAGGTTATGCGCTAAGGAGGAA
GCAGGCGCGCCTGGGCTTACTGCTGGTATTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTCTTCTGGCACCGCTGT
TGTTGGATCATGGGTTGAGCATGTCCGCATTGGGCGCGCTGTTCAGCGGCGGCAATATTGCAGCGGGCATAGCAGGAACG
CTGGCCGGCGGATTGCTGATGAAATACACCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGTCCAGGGGATCGCGCT
GCTGGCGGTGGTGATGACGCTCATGATGGCGCCGGGTCATCTGCTGCTGCCGATTCTCCAGTGTCTGGTCATTGTCCAGT
CCATTTCGCTGGCCTGCGCGCTGGTCTGTCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTGCAGGCCGGTGTCGAC
TTCACCCTCTTTCAATGTACTGACGCGGCAATCGCCATTCTGGCAGGCGTTATCGGTGGCGTTGTTGCTCAACATTTTGG
CTATGCGGCCTGCTTCCTGTTTGCCGGGGCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCCGGCTGCATTCGGCAA
GAGAACTGATGACAAGCGCAATTGATTGA

Protein sequence :
MRNCSHIMDVIRRCGRRKWPRACGATTGFPRLESGCMSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALV
RAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLPPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFPDTQIV
ALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLIMALSL
PLWRITEPTRTATIPHVPALGYALRRKQARLGLLLVLMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGT
LAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMMAPGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPLQAGVD
FTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSARELMTSAID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp8 YP_002346906.1 signal transducer Not tested HPI Protein 2e-128 100
ybtX YP_070128.1 MFS superfamily transporter signal transducer Virulence HPI Protein 2e-128 100
ybtX CAA21386.1 - Virulence HPI Protein 4e-148 100
ybtX NP_669702.1 hypothetical protein Virulence HPI Protein 3e-148 100
ybtX NP_993011.1 signal transducer Virulence HPI Protein 3e-148 100
irp8 CAB46571.1 signal transducer, Irp8 Virulence HPI Protein 8e-145 99
irp8 YP_001006811.1 putative signal transducer Not tested HPI Protein 2e-126 99
ybtX YP_853071.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 5e-147 99