|
Name : YPN_3685 (YPN_3685) Accession : YP_649612.1 Strain : Yersinia pestis Nepal516 Genome accession: NC_008149 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 4229430 - 4230749 bp Length : 1320 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGCAATCTTATTTTAATGAATTAGAACAAGTGCGCTACGAAGGTAGCCAGAGCACGAATCCTCTGGCGTTTCATCATTA CAACCCGGATGAAATGATCCTTGGTAAGCGAATGGCTGACCATCTGCGGTTTGCCGCCTGTTACTGGCATACCTTCTGCT GGGGTGGGGCCGATATGTTCGGTGCCAATGCTTTTGATCGCCCATGGCAACAACCTGGGGATGCACTGGCTCTGGCTAAA CGCAAAGCCGAGGTTGCATTTGAATTCTTCCATAAACTGAATGTACCGTATTACTGCTTCCATGATGTGGATGTCTCGCC AGAAGGCGCGTCACTACAGGAATATCTGAATAACTTCGCCGTAATGACCGATGTACTGGCTGAAAAACAAGCAGCCAGTG GTGTGAAATTATTATGGGGCACGGCTAACTGCTTTACCCATCCTCGTTATGGTGCTGGTGCCGCGACCAATCCTGATCCA GAAGTATTTAGCTGGGCAGCCACCCAGGTCTTTACGGCCATGAATGCCACCCGCCAACTCGGCGGTGAAAACTATGTGTT ATGGGGCGGACGTGAAGGCTACGAAACACTGTTGAATACCGATTTGCGACAAGAGCGTGAACAAATTGGCCGCTTTATGC AAATGGTCGTCGAACATAAACACAAAACGGGTTTCCAGGGGACACTCCTTATTGAGCCAAAACCGCAGGAGCCCACTAAA CATCAATACGATTATGACGTCGCGACAGTTTACGGCTTCCTTAAGCAGTTCGGCTTAGAAAAAGAGATTAAAGTCAATAT TGAAGCCAACCATGCCACGCTGGCGGGGCACTCTTTCCATCACGAAATTGCCAGTGCCATCGCCTTAGGTATTTTTGGCT CAGTGGATGCTAACCGGGGCGATCCGCAACTGGGCTGGGATACCGATCAATTCCCAAACAGTGTAGAAGAAAATACACTG GTGATGTTCGAGATCCTCAAAGCAGGCGGTTTTACCACCGGGGGCCTGAATTTTGATGCCAAAGTGCGCCGCCAAAGTAC CGATAAATATGATCTGTTCTACGGTCATATTGGCGCAATGGACACCATGGCACTGGCGCTAAAATTTGCCGCCAAAATGA TTGAAGATGGGCAATTAGATCAGATCGTTGCCAAACGTTATGCCGGTTGGAATAGCGAGCTGGGCCAACAGATCCTGCAA GGTAAAATGTCGCTGGAAGAGCTCTCCCGCTATGCCAGTCAACATAATCTGAACCCGCAGCACCAAAGCGGTCATCAAGA GTTGTTGGAGAATAAGGTTAACCGCTATTTATTTGGTTGA Protein sequence : MQSYFNELEQVRYEGSQSTNPLAFHHYNPDEMILGKRMADHLRFAACYWHTFCWGGADMFGANAFDRPWQQPGDALALAK RKAEVAFEFFHKLNVPYYCFHDVDVSPEGASLQEYLNNFAVMTDVLAEKQAASGVKLLWGTANCFTHPRYGAGAATNPDP EVFSWAATQVFTAMNATRQLGGENYVLWGGREGYETLLNTDLRQEREQIGRFMQMVVEHKHKTGFQGTLLIEPKPQEPTK HQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAGHSFHHEIASAIALGIFGSVDANRGDPQLGWDTDQFPNSVEENTL VMFEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKFAAKMIEDGQLDQIVAKRYAGWNSELGQQILQ GKMSLEELSRYASQHNLNPQHQSGHQELLENKVNRYLFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 6e-104 | 48 |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 8e-104 | 48 |
