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Name : YPN_3406 (YPN_3406) Accession : YP_649333.1 Strain : Yersinia pestis Nepal516 Genome accession: NC_008149 Putative virulence/resistance : Virulence Product : type III secretion system apparatus lipoprotein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 3880872 - 3881603 bp Length : 732 bp Strand : - Note : - DNA sequence : ATGAAATCTCTGCGGCAGATGTTAGCGATAGTCCTAATGACATTATCCCTTTCCGGTTGTGATATGGAGCTGTATAGCGG GCTGTCTGAGGGGGAGGCCAATCAAATGCTGGCATTGCTGATGCTGCACCAAATTAACGCCGAAAAACAGATCGAAAAGA GCGGGATGGTGGGGCTAACGGTCGATAAGCGGCAATTTATTAATGCCGTTGAGTTGCTACGACAGAATGGTTTCCCCCGA CAGCGTTTTATCACGGTGGATGAGCTGTTTCCTGCTAACCAGTTAGTGACCTCTCCCACGCAAGAGCAGGCCAAGATGGT TTTTCTGAAAGAACAGCAGTTGGAAAACATGTTGAGCCATATGGATGGGGTGATTCATGCCGATGTCACGGTGGCAATGC CTATGTCGGTTGACGGGAAAAACCCGCTTCCGCATACCGCCTCGGTGTTTATCAAGTATTCGCCGGAAGTCAATTTACAA AGCTATCAGTCGCAAATCAAAGGGTTGGTCCGCGATGCGGTTCCCGGTATTGATTACGCCAAGATAAGCGTGGTGATGCA GCCTGCGAACTACCGTTTCAGTGCCTCAGAGGCAGAGCAACAACAGGGGCCACAAACCACGGTGCAATGGTTATTACGCC ATGTAGGAATGGTGCAGAACATGGTGGGAGTAGCGTTTATCTCACTTATTGTATTGATGTTTGTAGGCTGGTTTTACTAT CGACGTCGGTAA Protein sequence : MKSLRQMLAIVLMTLSLSGCDMELYSGLSEGEANQMLALLMLHQINAEKQIEKSGMVGLTVDKRQFINAVELLRQNGFPR QRFITVDELFPANQLVTSPTQEQAKMVFLKEQQLENMLSHMDGVIHADVTVAMPMSVDGKNPLPHTASVFIKYSPEVNLQ SYQSQIKGLVRDAVPGIDYAKISVVMQPANYRFSASEAEQQQGPQTTVQWLLRHVGMVQNMVGVAFISLIVLMFVGWFYY RRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 3e-114 | 100 |
| ssaJ | CAA12196.1 | SsaJ | Virulence | SPI-2 | Protein | 8e-50 | 53 |
| ssaJ | CAA70532.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 2e-50 | 48 |
| ssaJ | YP_216417.1 | secretion system apparatus protein SsaJ | Virulence | SPI-2 | Protein | 8e-50 | 48 |
| ssaJ | NP_460374.1 | needle complex inner membrane lipoprotein | Virulence | SPI-2 | Protein | 3e-50 | 48 |
| ssaJ | NP_456119.1 | putative pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 3e-50 | 48 |
| ssaJ | NP_805080.1 | pathogenicity island lipoprotein | Virulence | SPI-2 | Protein | 3e-50 | 48 |
| escJ | AAK26710.1 | EscJ | Virulence | LEE | Protein | 5e-36 | 42 |
| escJ | AAL57537.1 | EscJ | Virulence | LEE | Protein | 5e-36 | 42 |
| escJ | CAC81857.1 | EscJ protein | Virulence | LEE II | Protein | 5e-36 | 42 |
| escJ | CAI43879.1 | EscJ protein | Virulence | LEE | Protein | 5e-36 | 42 |
| escJ | YP_003223480.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 7e-36 | 42 |
| escJ | YP_003232148.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 7e-36 | 42 |
| escJ | YP_003236093.1 | T3SS structure protein EscJ | Virulence | LEE | Protein | 2e-36 | 41 |
| escJ | NP_290273.1 | hypothetical protein | Virulence | LEE | Protein | 2e-36 | 41 |
| ECs4573 | NP_312600.1 | EscJ | Virulence | LEE | Protein | 2e-36 | 41 |
| escJ | AAC38379.1 | EscJ | Virulence | LEE | Protein | 1e-36 | 41 |
| escJ | AAC31518.1 | L0039 | Virulence | LEE | Protein | 1e-36 | 41 |
| escJ | ACU09463.1 | EscJ protein | Virulence | LEE | Protein | 1e-36 | 41 |
| unnamed | AAL06364.1 | EscJ | Virulence | LEE | Protein | 2e-36 | 41 |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 1e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPN_3406 | YP_649333.1 | type III secretion system apparatus lipoprotein | VFG0510 | Protein | 1e-50 | 48 |
| YPN_3406 | YP_649333.1 | type III secretion system apparatus lipoprotein | VFG0218 | Protein | 1e-37 | 42 |
| YPN_3406 | YP_649333.1 | type III secretion system apparatus lipoprotein | VFG0817 | Protein | 7e-37 | 41 |
| YPN_3406 | YP_649333.1 | type III secretion system apparatus lipoprotein | VFG0725 | Protein | 7e-37 | 41 |
