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Name : YPN_3019 (YPN_3019) Accession : YP_648946.1 Strain : Yersinia pestis Nepal516 Genome accession: NC_008149 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3390038 - 3391399 bp Length : 1362 bp Strand : - Note : - DNA sequence : GTGGCTCATAGTCCAATACTTTTTAATTTAGTTACTGATGAAGAGTTTGAAAATAATTTAACTGAACGCTACCAAAATAA TTCGGCTGACCCATATCAGACAATGAGCGTTATCAGCAATGAGATCGACATTTACTCTTTTGCTAACGAATTATCTGACG ATGATGATTTATTGGATATAAATGATGAAGCACCTGTAATAAAATTAATCAATAGCATTCTGGTCGAAGCAATTAAAGAG TTAGCATCTGATATACACATAGAGTCTTTCGATAAAAAACTTACTGTAAGATTTCGTATTGATGGTGTGTTAAGGAAAAT ATTGGAATTACAGCGCCATGTTGCACTATTATTAGTGTCGCGTATAAAAGTCATGGCCAAATTAGATATTGCAGAAAAAC GTATTCCACAAGATGGGCGCATAGCTCTAAATTTAGCGGGTAGAGCATTGGATGTTCGTGTTTCGGTATTACCATCTAGC CATGGTGAACGGGTCGTTATGCGTTTGCTTGACAAAAATAGCATTAAATTGGATTTACCCTCATTAGGTATGTCGAAAGA TAACTGTATTTCTATGAATACGCAGGTACATAAACCCCATGGCATTATCTTGGTTGTTGGCCCAACGGGTTCGGGTAAAA GCACTACGTTATATGCTGCTTTAATGGGGATTGACGCGAATGAGAAAAATATTATGACTGTAGAAGACCCTATTGAGTTC GACATACCTGGTATATCCCAAACGCAAGTAAACCCAAAAATTGAAATGACATTTGCTCGTAGCTTAAGGGCAATATTACG CCAAGATCCTGACGTTATTCTTATCGGTGAAATTCGTGATATTGAAACGGCACAGATAGCGGTCCAAGCTTCTCTAACCG GCCATTTAGTTCTATCTACATTACATGCCAACAGTGCGATAGGTGCAGTGACCAGACTGAAGGATATGAATGTAGAGGCA TTTATGCTTTCAAGTTCATTATTGGCCATCATATCTCAGCGGTTGGTTAGAAGATTATGTATAGCGTGTCGCCAAGAGTC GTCAGTGACGGAGAAGGTATTACAACGTCTGAATATTGATGATAAATGCTCTTTGGTTGGTTCGGTGTACCGGGCTAAAG GTTGTAACAAATGTAATCTTACTGGTTATCGTGGACGTATTGCTCTCCATGAATTTCTCGTAGTGGATAACTTATTGCGG GGGGCTATTTATAAAGGGCTAGGAGAGTTTGAACTGGCTAAATTGGCCAGTGGGGCTATAAACAGCCTTCTATCTGATGG GATAAGCAAAGTTATTGCAGGGTTAACCACTATAGAGGAACTGGTAAGAATATGCCAAGAGGATGATAATGGCTGTATTT AA Protein sequence : MAHSPILFNLVTDEEFENNLTERYQNNSADPYQTMSVISNEIDIYSFANELSDDDDLLDINDEAPVIKLINSILVEAIKE LASDIHIESFDKKLTVRFRIDGVLRKILELQRHVALLLVSRIKVMAKLDIAEKRIPQDGRIALNLAGRALDVRVSVLPSS HGERVVMRLLDKNSIKLDLPSLGMSKDNCISMNTQVHKPHGIILVVGPTGSGKSTTLYAALMGIDANEKNIMTVEDPIEF DIPGISQTQVNPKIEMTFARSLRAILRQDPDVILIGEIRDIETAQIAVQASLTGHLVLSTLHANSAIGAVTRLKDMNVEA FMLSSSLLAIISQRLVRRLCIACRQESSVTEKVLQRLNIDDKCSLVGSVYRAKGCNKCNLTGYRGRIALHEFLVVDNLLR GAIYKGLGEFELAKLASGAINSLLSDGISKVIAGLTTIEELVRICQEDDNGCI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 7e-119 | 55 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 5e-119 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPN_3019 | YP_648946.1 | general secretion pathway protein E | VFG2048 | Protein | 2e-118 | 55 |
| YPN_3019 | YP_648946.1 | general secretion pathway protein E | VFG0182 | Protein | 6e-116 | 54 |
| YPN_3019 | YP_648946.1 | general secretion pathway protein E | VFG1876 | Protein | 5e-107 | 51 |
| YPN_3019 | YP_648946.1 | general secretion pathway protein E | VFG2426 | Protein | 4e-71 | 45 |
