Gene Information

Name : YPN_1010 (YPN_1010)
Accession : YP_646942.1
Strain : Yersinia pestis Nepal516
Genome accession: NC_008149
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1168460 - 1169146 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAGCGGAAAACGTTCTTGAAGTTCATCATCTTAATAAGCACGTCGGTCAGGGTGAGCAACAGCTCTCCATCCTTAC
CGGAGTTGAGCTGGTTGTCAAACCTGCCCAGACAATTGCGCTGATTGGCGAGTCGGGTTCAGGCAAATCAACATTATTGG
GGATTCTGGCCGGGCTGGATGATGGCAGCAGCGGTGATGTGAGCTTGCTTGGGCAGTCATTGACCACGATGGATGAAGAA
GGTCGCGCGCTACTCCGGGCGAAAAATGTCGGCTTTGTCTTTCAGTCGTTTATGTTGGTTCCTACATTGAACACGCTTGA
AAACGTTCAACTACCGGCATTACTCCGTGGTGAGAGTGATCGCCAAAGCAAATCGCAAGCTATTGAATTATTGGAGCAAC
TTGGGCTGGGCAAGCGCCTTTACCATCTTCCCGCCCAACTGTCCGGTGGTGAACAACAGCGAGTTGCACTGGCCCGGGCT
TTCAGTGGGCGGCCAAAAATCTTATTTGCTGATGAGCCAACCGGTAATCTTGACCGGCAGACGGGTGATCGTATCGCTGA
TTTGCTGTTTTCCCTAAACCGGGATTTCGCGACCACGTTGATTCTGGTCACACATGATGAACAACTGGCCGGTCGTTGTC
AGCGTCGGTTGCGCCTGAGGGACGGTAAATTGTGGGAGGAGTCATGA

Protein sequence : 
MPAENVLEVHHLNKHVGQGEQQLSILTGVELVVKPAQTIALIGESGSGKSTLLGILAGLDDGSSGDVSLLGQSLTTMDEE
GRALLRAKNVGFVFQSFMLVPTLNTLENVQLPALLRGESDRQSKSQAIELLEQLGLGKRLYHLPAQLSGGEQQRVALARA
FSGRPKILFADEPTGNLDRQTGDRIADLLFSLNRDFATTLILVTHDEQLAGRCQRRLRLRDGKLWEES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPN_1010 YP_646942.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 6e-34 45
YPN_1010 YP_646942.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 3e-38 43
YPN_1010 YP_646942.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 8e-36 41