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Name : Rxyl_0752 (Rxyl_0752) Accession : YP_643532.1 Strain : Rubrobacter xylanophilus DSM 9941 Genome accession: NC_008148 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 781813 - 783918 bp Length : 2106 bp Strand : + Note : KEGG: cac:CAC3567 topoisomerase B; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM DNA topoisomerase, type IA, central; SMART: DNA topoisomerase, type IA, domain 2 DNA topoisomerase, type IA, DNA-binding Toprim subdomain DNA sequence : ATGAGGCTGATCGTCGCCGAGAAGCCCTCCGTGGGGAGGGACATAGCCGGCGCCCTGGGCCGCCACCGCCGCGAGGGGGA CGCCCTCGTCGGGAGCGGCTGGGTCGTAACCTGGGCGCTCGGGCACCTCGCCGAGCTCGCCCCGCCCGACGCCTACGGCG CCGAGTACAAGCGGTGGAGCCTACAGAACCTCCCCATACTCCCCGAGCGGTTCAGGGTCCGCGTCAACCCGAGGACCCGC GAGCGGTTCGAGGCCGTGAGGCGGTGGATGCGCGACCCCTCGGTGACCGAGGTCGTAAACGCCTGCGACGCCGGGAGGGA GGGCGAGCTCATCTTCGCCTACCTCTACCAGCTCTCCCGCTGCGAAAAGCCGGTGAGGCGGCTCTGGGTCTCCTCGCTCA CCCCAGAGGCGATCCGCGAGGGCTTCGGCTCCTTGCGCGACGGCCCCTCCATGAAGCCCCTCGAGGACGCCGCCCGCAGC CGCGCGGAGGCCGACTGGATCGTGGGGATGAACGCCACCCGCGCCTACTCCGTGCGCTTCTCGCGCCCCGGCGACGTCCT CTCCGTGGGGCGCGTCCAGACCCCCACCCTCAGGCTGCTCGTCGAGCGCGAGCGGGAGATAGAGGACTTCAGGCCCGAGA GGTTCTTCACCGTCCACGCCCGCTTCGCGCGCGACGGGAAGACCTACGACGGCCTCTGGTTCAGGGAGAAGGAGAGCCGC CTCAAGGAGCGGGAGGCCGCCGAGCAGATAGCGGAGAAGGTCCGCGGCGGCACCGGCGTCGTGAAGAAGGCCGAGAGGCG GCGGACCTCCGAGAGGCCGCCGCTCCTCTACGACCTCACCGAGCTCCAGCGCAACGCCAACGCCCGCTACGGCTTCACCG CCGAGAGGACGCTCCGGGCCGCCCAGGCGCTCTACGAGGAGCGCAAGCTCATAACCTACCCCCGCACCTCGAGCCGCTAC CTCTCGGGGGACATGGTCGGCACGCTCAAGAGGCGCGTCGAGGCGGCGGGGGGCCTGCCGGAGCTCGCGCCCTTCGCCGG GAGGCTGCTCGCGGCGGGAAGCCTCCCGGTCGGCAGGCGCGTCGTGGACGACTCGAAGGTCACCGACCACCACGCCATCG TCCCGACGGACAGGAAGCCCTCCGGCGGCCTGCCGCCCGACGAGGCGAAGGTCTACGACCTGGTGGCGCGGCGCTTCCTC GCGGTCTTCTTCCCGGCGGCCCGCTTCGAGAACACGACCGTCGTGACGGAGGCGCGCGGGGAGACGTTCCTGAGCAAGGG GCGGGTGGTGCTCGAGGCCGGGTGGCGGGAGCTCTACCCGGACGGCGTCGGCGGCAGGAAGGAGAAGGAGCCGCCCGCGC TGCCCCCCGTGGAGGCCGGCCAGGAGTGGCGGGTGGCGAAGGTGGGGGTCAAGGAGGGCGAGACAAAGCCGCCGCCGCGC TACTCCGAGTCGGCGCTCCTGGGGGCCATGGAGACCGCCGGGAAGCTCGTCGAGGACGAGGAACTGCGGCAGCAGATGAA GGACTCCGGGCTCGGCACCCCCGCGACGCGGGCGGCGATCATCGAGCGCCTCATAAAGGTCGGCTACGTAGAGCGGGAGA AGAAGGCGCTCGTCCCCACCGCCAAGGGGCGCGCCCTGATCTCCCTGCTCGCGGATAGCCCGCTCTCCTCGCCCGAGATG ACCGCCCGCTGGGAGCGGCGCCTCGCCCGCATAGAGCGCGGCGAGGAGCGGCGCCCGGACTTCATGTCCGACATAAGCGG CTTCGCCGCCTCCGTCGTCGAGGGCGTGCGCCGCATGGAGGGCGAGAAGATAGCCGCCCCCGGAGGCGGAGGGGAGGCCC TCGGCGCCTGCCCGAAGTGCGGCTCCCCGGTGGTCGAGACGAAGAAGGCCTACGGGTGCTCAGCGTGGAGGAAGACCGGC TGCGACTTCGCCATCTGGAAGCGCGTCGCCGGGAAGCGCGTGAGCGAGTCGCAGGCCAGGCAGCTACTCGCGAAGGGCAG GACCGCGCGGCTCAAGGGCTTCAAGAGCAGGGCCGGAAAGCCCTTCTCCGCGGCACTCGTGCTCGACGGGGAGCACCGGG TGCGGCTGGAGCCCTTCCGGGGCTAG Protein sequence : MRLIVAEKPSVGRDIAGALGRHRREGDALVGSGWVVTWALGHLAELAPPDAYGAEYKRWSLQNLPILPERFRVRVNPRTR ERFEAVRRWMRDPSVTEVVNACDAGREGELIFAYLYQLSRCEKPVRRLWVSSLTPEAIREGFGSLRDGPSMKPLEDAARS RAEADWIVGMNATRAYSVRFSRPGDVLSVGRVQTPTLRLLVEREREIEDFRPERFFTVHARFARDGKTYDGLWFREKESR LKEREAAEQIAEKVRGGTGVVKKAERRRTSERPPLLYDLTELQRNANARYGFTAERTLRAAQALYEERKLITYPRTSSRY LSGDMVGTLKRRVEAAGGLPELAPFAGRLLAAGSLPVGRRVVDDSKVTDHHAIVPTDRKPSGGLPPDEAKVYDLVARRFL AVFFPAARFENTTVVTEARGETFLSKGRVVLEAGWRELYPDGVGGRKEKEPPALPPVEAGQEWRVAKVGVKEGETKPPPR YSESALLGAMETAGKLVEDEELRQQMKDSGLGTPATRAAIIERLIKVGYVEREKKALVPTAKGRALISLLADSPLSSPEM TARWERRLARIERGEERRPDFMSDISGFAASVVEGVRRMEGEKIAAPGGGGEALGACPKCGSPVVETKKAYGCSAWRKTG CDFAIWKRVAGKRVSESQARQLLAKGRTARLKGFKSRAGKPFSAALVLDGEHRVRLEPFRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB-2 | NP_815968.1 | DNA topoisomerase III | Not tested | Not named | Protein | 1e-117 | 41 |
