Gene Information

Name : Rxyl_0537 (Rxyl_0537)
Accession : YP_643323.1
Strain : Rubrobacter xylanophilus DSM 9941
Genome accession: NC_008148
Putative virulence/resistance : Unknown
Product : 2-deoxy-D-gluconate 3-dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 567143 - 567913 bp
Length : 771 bp
Strand : -
Note : TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xcb:XC_0161 2-deoxy-D-gluconate 3-dehydrogenase

DNA sequence :
ATGGGCGTGCTGGATAGCTTCCGGCTGGACGGGAGGGTGGCCCTGGTGACCGGGGCGGCCCAGGGGCTGGGGCAGGGGAT
CGCCGTCGGGCTCGCCGAAGCCGGGGCGCACATCGCCGCGCTGGACGTCATGCCCCTCGACGAGACGCGGGAGAGCGTCG
CCGCGGAGGGCCGCAGGTTCCATGCCATGGAGTACGACCTGCGGAAGACCGGCGCCGGCCTCGCCGCCAGGATCGTAGGC
GAGTGCGTAGAGGCGATGGGCCGCCTGGACATCCTGGTGAACAACGCGGGCATCATCCGCCGCGCCCCCGCGCTGGAGTT
CTCCGAGGAGGACTGGGAAGAGGTCATCCGCGTCAACCTCTCGGCCGCCTTCTACCTCTCCCAAGCCGCCGCCCGGCATT
TCGTGGAGGCCGGGCGGGGAGGCAAGATCATCAACCTGGCCTCGGTCCTCTCCTACGAAGGCGGCATCCTCGTCCCCTCC
TACTCGGCCTCGAAGGCGGGCATCGCCAACCTCACCCGGGCGCTGGCGAACGAGTGGGCCCCGATGGGCATCAACGTGAA
CGCAATCGCCCCCAGTTACTTCGCCACCAGCCTGACGAGCGCGCTGCGCGCGGACCCGGAGCGCTCGGAGGCCCTGCTTG
CGCGCATCCCGGCGGGGCGCTGGGGCACCCCGGAAGACCTGAAGGGCGCGGCCGTCTTCCTGGCCTCGGACACCGCCTCC
TACGTACACGGCGCCGTGGTGCCGGTGGACGGCGGCTGGCTGGGACGCTAG

Protein sequence :
MGVLDSFRLDGRVALVTGAAQGLGQGIAVGLAEAGAHIAALDVMPLDETRESVAAEGRRFHAMEYDLRKTGAGLAARIVG
ECVEAMGRLDILVNNAGIIRRAPALEFSEEDWEEVIRVNLSAAFYLSQAAARHFVEAGRGGKIINLASVLSYEGGILVPS
YSASKAGIANLTRALANEWAPMGINVNAIAPSYFATSLTSALRADPERSEALLARIPAGRWGTPEDLKGAAVFLASDTAS
YVHGAVVPVDGGWLGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 1e-26 42