Gene Information

Name : Rxyl_0502 (Rxyl_0502)
Accession : YP_643288.1
Strain : Rubrobacter xylanophilus DSM 9941
Genome accession: NC_008148
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 537013 - 537747 bp
Length : 735 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: dde:Dde_1428 ATPase

DNA sequence :
ATGAGCATCATAGAGTTCCGCAACGTGAGCAAGTCCTTCGGGGACTTCGAGGTCCTCAAGGGCATAGACTTCTCCGTGGA
GGAGGGCGAGGTGGTGGTCATCATAGGGCCCTCCGGGTCGGGGAAGAGCACCCTCCTGCGGTGCATCAACGCGCTGGAGG
GCATCTCCTCCGGCGAGCTCATCGTGGACGGCATCCGGGTGCACGACAGAAAGGCCGACCTGAACCGGCTGCGCACCGAG
ATAGGGTTCGTCTTCCAGCAGTTCAACCTCTACCCGCACATGACGGTCGCCGAGAACGTCATGCTCGCCCCGATGAAGGT
GCGGAAGCTCTCCCGCAAGGAGGCCGAGGAGCGGTGCATGCGGCTGCTCGAGCGGGTGGGGATCCCGGAGCAGGCCGGCA
AGTACCCGGAGAACCTCTCCGGCGGCCAGCAGCAGCGGGTGGCCATAGCGCGGGCGCTGGCGATGGAGCCCAAGATCATG
CTCTTCGACGAGCCCACGAGCGCCCTGGACCCGGAGATGATCAACGAGGTGCTCGAGGTGATGGTGGACCTGGCCCGCGG
CGGGATGACGATGGTGGTCGTCACCCACGAGATGGGCTTCGCCCGGCGCGTGGCCGACCGGGTGGTCTTTATGGACGAGG
GCCGCATCCTGGAGGAGGGCCCCCCGGAGCACTTCTTCGAGAACCCGGAGAACGAGCGCACCAAGAGGTTTCTGGACCGC
ATCCTGCACATGTAG

Protein sequence :
MSIIEFRNVSKSFGDFEVLKGIDFSVEEGEVVVIIGPSGSGKSTLLRCINALEGISSGELIVDGIRVHDRKADLNRLRTE
IGFVFQQFNLYPHMTVAENVMLAPMKVRKLSRKEAEERCMRLLERVGIPEQAGKYPENLSGGQQQRVAIARALAMEPKIM
LFDEPTSALDPEMINEVLEVMVDLARGGMTMVVVTHEMGFARRVADRVVFMDEGRILEEGPPEHFFENPENERTKRFLDR
ILHM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-21 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-23 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-19 42
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-19 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rxyl_0502 YP_643288.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-21 42