Gene Information

Name : Rxyl_0045 (Rxyl_0045)
Accession : YP_642838.1
Strain : Rubrobacter xylanophilus DSM 9941
Genome accession: NC_008148
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 46145 - 46570 bp
Length : 426 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tde:TDE1677 single-strand binding protein

DNA sequence :
ATGGTCAGCTTCAACCGGGTGATACTCGCGGGCAACCTCACGCGGGACCCCGAGCTCAGGTTCACCAGCGACGGGGTGCC
GGTGTGCTCCTTCGGCATAGCGGTAAACCGGGTGCGCTCCAGGAACGAGGAGGTGGACTTCTTCGACGTCTCGGCCTGGC
GCGAGCTCGGCGAGACCATCGCCAACTACAAGAAGAAGGGCGACCCGATCCTGATCGAGGGTCGCCTGCAGTACCGGACC
TGGGAGGCCCAGGACGGCACGCGGCGCTCGAAGGTGGACATCGTGGCGGACAACGTCCAGTTCCTCGGGCGCGGCGGAGA
CCCGGGCGAGGGGGGTGGCTCCTCCGGCGGCCAGGGCCGGCGCGGGCGCGGCGCCGGCGACGAGGTGGACATCAACGAGT
CGGACTTCGACGACATCCCCTTCTAG

Protein sequence :
MVSFNRVILAGNLTRDPELRFTSDGVPVCSFGIAVNRVRSRNEEVDFFDVSAWRELGETIANYKKKGDPILIEGRLQYRT
WEAQDGTRRSKVDIVADNVQFLGRGGDPGEGGGSSGGQGRRGRGAGDEVDINESDFDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 1e-14 45
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 7e-15 44
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 9e-15 44
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-13 44
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 7e-15 44
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 7e-12 43