Gene Information

Name : Rxyl_2905 (Rxyl_2905)
Accession : YP_645627.1
Strain : Rubrobacter xylanophilus DSM 9941
Genome accession: NC_008148
Putative virulence/resistance : Unknown
Product : succinate semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.16
Position : 2907287 - 2908771 bp
Length : 1485 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: btk:BT9727_0295 succinate-semialdehyde dehydrogenase (NAD(P)+)

DNA sequence :
ATGAACGTGGAGCGGGAGGGAAGAGTGGAGACCCGGATGATCGAGCGGTTGTTTGTGGGGGGCGAGTGGGTGGGGGAGGC
CTCTACGGGCCGCACCTTCGAGGTAGAGAACCCGGCGAGCGGGCGGGTGATCGCCGTTTTGCCCGACGGGGGTGGCGGGG
AGATGCGGCGGGCGGTAGAGGCCGCCGTTGCGGCGCAGCCGGGCTGGGAGGAGGCCACGGCCTACGAGCGGGCCTCTGTG
CTGTGGCGGGCGGCGGGGCTGATGCGCGAGAGGGCCGAGCACCTGGCGCGGGTGATGACCCTGGAGCAGGGGAAACCGCT
CGCCGAGAGCCGGGGTGAGATCTCCTACGCCGCCTCGTTTGTGGAGTGGTTTGCCGAGGAAGGCAAGCGCGTCTACGGGG
AGAGCGTCCCCTCGAGCTTCAGGGACAAGCGGATCCTCGTGCTAAAGCGTCCCGTTGGGGTGGCGGCGGCCATAACCCCG
TGGAACTTCCCCGCCGCCATGATCACGCGCAAGCTCGCCCCCGCCCTGGCCGCCGGGTGCGCGATGGTCGTAAAGCCCTC
CGAGCTCACCCCGCTCTCGGCGCTAGAGCTTGCAAAGATCTTCGAGGAGGCCGGGCTGCCCCGGGGGCTGCTCTCGGTCG
TCGTGGGGACCGACCCCGGGGACATAACGGCTCCCCTCATGGAGGACGGCAGGGTGAGGAAGCTCTCGTTCACCGGCTCC
ACCGAGGTGGGCAAGCACCTCATGCGCCAGGCGGCAAAGACCATGAAGCGTCTCTCCCTGGAGCTTGGGGGGCACGCCCC
CTTCATCGTCTTCGAGGACGCCGACCTGGAGGCGGCGGTGGAGGGGGCTCTGGTCTCCAAGATGCGCAACATGGGCCAGA
CCTGCGTGTGCGCCAACCGCATCTTCGTGCAAAAAAGCGTGCTCGAGCCCTTTGCCGAGAGGCTGGTGGAGAGGATGGGC
CGGATGAAGGTGGGGGACGGGCTTCAGGAGGGGGTCAGCGTGGGCCCGCTCATAGAAGAGCGGGCCCTGAGAAAGGTCGA
GCGGCACGTGGAGGACGCAAGGCAAAAAGGGGCCAGGGTGCTGCTTGGGGGGAGCCGCCTCTCCTCCGGAGGGGGGTACT
TCTTCGCGCCCACCGTGCTCTGCGGGGCCGACGAGAGCATGCTCGTCTTCAGGGAGGAGACCTTCGGGCCGGTGGCGGCG
CTTGCTTCCTTTGAGAGCGAGCAGGAGGTCGTAGAGCGGGCCAACGCCACGCCCTACGGGCTTGCAGGCTACTACTACAC
CAGGGACGTGGGGCGGGTCATGAGGCTGGCCGAGAAGCTGCGGTACGGTATCCTCGGGGCCAACGACGGGCTGCCCTCCA
CCGCCCAGGCGCCCTTTGGGGGGCTCAAGGAGAGCGGCTTTGGGAGAGAAGGGGGACACTGGGGCATAGAGGAGTACCTC
GACGTCAAGTACCTCTCGCTGGGCGGTTTGGGGAGTTCTTCCTAG

Protein sequence :
MNVEREGRVETRMIERLFVGGEWVGEASTGRTFEVENPASGRVIAVLPDGGGGEMRRAVEAAVAAQPGWEEATAYERASV
LWRAAGLMRERAEHLARVMTLEQGKPLAESRGEISYAASFVEWFAEEGKRVYGESVPSSFRDKRILVLKRPVGVAAAITP
WNFPAAMITRKLAPALAAGCAMVVKPSELTPLSALELAKIFEEAGLPRGLLSVVVGTDPGDITAPLMEDGRVRKLSFTGS
TEVGKHLMRQAAKTMKRLSLELGGHAPFIVFEDADLEAAVEGALVSKMRNMGQTCVCANRIFVQKSVLEPFAERLVERMG
RMKVGDGLQEGVSVGPLIEERALRKVERHVEDARQKGARVLLGGSRLSSGGGYFFAPTVLCGADESMLVFREETFGPVAA
LASFESEQEVVERANATPYGLAGYYYTRDVGRVMRLAEKLRYGILGANDGLPSTAQAPFGGLKESGFGREGGHWGIEEYL
DVKYLSLGGLGSSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 9e-115 54
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 1e-82 41