Gene Information

Name : Rxyl_1561 (Rxyl_1561)
Accession : YP_644335.1
Strain : Rubrobacter xylanophilus DSM 9941
Genome accession: NC_008148
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (acceptor)
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 1581544 - 1583055 bp
Length : 1512 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: bte:BTH_I0877 aldehyde dehydrogenase family protein

DNA sequence :
ATGAGCGCCCCCGCTTCGGAGGTTCACCCCAAGCTCTTCATCGCCAATGAGTGGAGACCCAGCCATACCGGCCAGACATT
CGAGACGGTGGACCCCTCGACCGAAGAGGTTATCGCATCTATCCCGCGCGGAGGCGCCGAGGACGTCGATGAAGCTGTGA
GCGCCGCCAGGGAGGCCTTCAACGGCCCCTGGCGGCGCCTCACCCCCGAGGATCGGGCCAGATTCCTCTACCAGGTGGCA
AGGAGCCTTGAGTCCAGATTGGAAGAATTCGCCCGGCTGGAGACGCTGGATACCGGCAAACCTCTGCAACATTCTCGAAA
CGAGATCCGAAATTGCGTGCGCTATTTTGATTACTATGCCGGCGCCGCCGACAAGATCCACGGCGAGACCATCCCGCTGG
GTCCCAATTACCTGGACTACACGGTCCGCGAGCCGCTCGGCGTGACCGCACACATCGTGCCATGGAACGTGCCTTTAGGC
ATGGTCTGCCGCAGCCTGGCTCCAGCACTGGCCGCCGGCAATGCAGCCGTTGTGAAGCCAGCAGAGCAGACGCCGCTTAC
CGCTCTTAAGCTCGCGGAGCTCTTCCTGGAGCTAGACGCCCCGCCGGGCGTCTACAACGTGGTGACCGGCTTTGGGGAAG
AGGCGGGTCGGGCGTTGAGCGAGCATCCTGGCATAGATTCGATCACCTTCACCGGTTCTGTGGAGACGGGCCGTGCCGTT
CTCAGAGCCGCGGCGGAGCACGTAAGGCCGGTCGTTTTAGAGCTCGGCGGCAAGTCTCCGCAGGTTGTATTCGCAGACTG
CGACCTCGATTTTGCTGCGGACGAAGTAGCGAAGGGAATCTACTCCAATTCGGGGCAGTATTGCGACGCGGGCTCCCGGC
TGCTGATCGATGGCTCGATCAAAGAGCCTTTTTTGGAGAAGGTGATCGAACGCGCACGAGCAATAAAACTCGGCGCAGGG
ATGGACGAACCTGACATGGGACCGCTGGTCTCCGAGGAGCATTTCAAGCGCGTTCTGGGCTATATAGAAGTGGGAAATAA
GGAGGGCGCGCGCATGCTCACCGGCGGGCGTGCCGAGGGGTTTGAGAGAGGGTACTTTGTTGCCCCCACCATCTTCGACG
AGGTAGAAAGCAACATGCGCATCGCCCAGGAAGAGATCTTCGGTCCGGTGTTGGCCACGTTGTCTTTTGGCAGCGAAGTT
GAAGCCATCGAGATCGCAAACGACTCCAGCTATGGATTGGCGGCTGGCATCTTTACCCGCGATATAGATCGAGCACTGCG
CTTCGCAAGCGAGATTCAAGCCGGTTATGTAATGATCAATGAATATTTCTCGGGCGGCATGGGCTCGCCGTTTGGCGGCT
ATAAGCAGAGTGGCATCGGCAGGGAGAGAGGCTTGATAGCGCTGGACAACTACACGCAGATCAAGAACGTCGTGGTGAAG
GTCGGGCAGAGACTTCCACGCCGCTCTGCGGGCATACAAGACGCGCTTGCACCAATTACCAAGCCAGGATGA

Protein sequence :
MSAPASEVHPKLFIANEWRPSHTGQTFETVDPSTEEVIASIPRGGAEDVDEAVSAAREAFNGPWRRLTPEDRARFLYQVA
RSLESRLEEFARLETLDTGKPLQHSRNEIRNCVRYFDYYAGAADKIHGETIPLGPNYLDYTVREPLGVTAHIVPWNVPLG
MVCRSLAPALAAGNAAVVKPAEQTPLTALKLAELFLELDAPPGVYNVVTGFGEEAGRALSEHPGIDSITFTGSVETGRAV
LRAAAEHVRPVVLELGGKSPQVVFADCDLDFAADEVAKGIYSNSGQYCDAGSRLLIDGSIKEPFLEKVIERARAIKLGAG
MDEPDMGPLVSEEHFKRVLGYIEVGNKEGARMLTGGRAEGFERGYFVAPTIFDEVESNMRIAQEEIFGPVLATLSFGSEV
EAIEIANDSSYGLAAGIFTRDIDRALRFASEIQAGYVMINEYFSGGMGSPFGGYKQSGIGRERGLIALDNYTQIKNVVVK
VGQRLPRRSAGIQDALAPITKPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-71 44
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-72 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-75 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-75 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-75 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rxyl_1561 YP_644335.1 aldehyde dehydrogenase (acceptor) VFG0082 Protein 2e-72 41