Gene Information

Name : Rxyl_1319 (Rxyl_1319)
Accession : YP_644095.1
Strain : Rubrobacter xylanophilus DSM 9941
Genome accession: NC_008148
Putative virulence/resistance : Resistance
Product : small multidrug resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 1348128 - 1348448 bp
Length : 321 bp
Strand : -
Note : PFAM: small multidrug resistance protein; KEGG: sco:SCO1918 putative integral membrane protein

DNA sequence :
GTGAGCTGGCTGCTCCTGCTCGGCGCGATAGCCGCCGAGGTCGCCGGCACCTTCAGCCTCAAGCTCTCCGATGGGCTCAG
CCGGGCCGGCCCCACGCTCATGGTCGTGGTCTTCTACGGCCTCAGCTTCTACCTGCTCTCCCTGGTGCTCCGGAGGATGG
ACGTAGGCGTAGCCTACGCCGTGTGGTCCGGGCTCGGCACGGCGCTCGTGGCGATCGTCGGCATCGCGCTCTTCGGGGAG
GAGATGACCGCGGCGAGGGCCCTGGCGCTCGCGCTCATCATAGCCGGGGTCATGCTGCTCAACCTCTCCGGGGCCCACTA
G

Protein sequence :
MSWLLLLGAIAAEVAGTFSLKLSDGLSRAGPTLMVVVFYGLSFYLLSLVLRRMDVGVAYAVWSGLGTALVAIVGIALFGE
EMTAARALALALIIAGVMLLNLSGAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 1e-13 45
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 1e-13 45
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 2e-13 45
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 1e-13 45
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-13 45
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-13 45
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-13 45
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-13 45
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-13 45
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 2e-13 45
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 1e-13 45
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-13 45
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 2e-13 45
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 1e-13 45
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 1e-13 45
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-13 45
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 1e-13 45
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-13 45
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 1e-13 45
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 1e-13 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0140 Protein 8e-08 47
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0322 Protein 4e-14 45
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0139 Protein 1e-12 45
Rxyl_1319 YP_644095.1 small multidrug resistance protein CP004022.1.gene1549. Protein 6e-10 45
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0192 Protein 2e-11 45
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0324 Protein 5e-13 45
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0323 Protein 5e-14 45
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0249 Protein 3e-07 43
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0329 Protein 7e-11 43
Rxyl_1319 YP_644095.1 small multidrug resistance protein AE000516.2.gene3301. Protein 3e-07 43
Rxyl_1319 YP_644095.1 small multidrug resistance protein NC_010410.6003348.p0 Protein 2e-11 43
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0002 Protein 2e-11 43
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0377 Protein 2e-10 42
Rxyl_1319 YP_644095.1 small multidrug resistance protein BAC0378 Protein 4e-07 41