Gene Information

Name : Mmcs_5505 (Mmcs_5505)
Accession : YP_642661.1
Strain :
Genome accession: NC_008147
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 79936 - 81360 bp
Length : 1425 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: cdi:DIP0764 putative transposase

DNA sequence :
GTGGCCAAGCGTAAGGACGCGGAATCGGTTGGTAGGCGACGGCAGTGGGCGGCTGACCGTGCGTTGCGGCCTGCGATGCG
CTCACCAGGGCGCCCGGACCCGTCGCGGTCGGTGCAGCGTCAGTTTTGGCGGCTGATCGCCCAGGGTGTCTCCACCGACG
ACGCAGCCGCAGAGGTCGGCGTGTCGACACCGGTGGCGACCAGGTGGTTCCACCACGCTGGCGGCATGACGCCGATCAGT
CTGGATGAGCCCACGGGCCGGTATCTGTCGTTCGCCGAGCGGGAGGAGATCGCACTGCTACGCGCCCAGGGCGCCGGGGT
GCGTGAGATCGCCCGCGAGATCAAGCGTGACCCCTCGACAGTTTCGCGGGAACTGCGGCGCAACGCAGCCACCCGCAGCG
GCACGCAGGTGTACCGCGCAGGGGTGGCGCAGTGGAAGGCCCAGCAAGCAGCAAAGCGCCCGAAACCCGCGAAACTGGCA
GTCAACCCGCAGCTGCGTGAGTACGTGCAGCAGCGGCTCGATGGCAGTGTCCGCGGACCCGACGGCACCGCCGTCGCAGG
TCCGCAGACCAAGGCCTGGAACGGCCGCAACAAGCCGCACCGACAAGACCGACGGTGGTCGACAGCATGGAGCCCGGAAC
AGATTGCCCACCGCTTACCGCTGGATTTCCCCGATGATGAGTCCATGCGCATCAGCCATGAGGCGATCTATCAGTCCTTG
TTCATCGAGGGGCGTGGGGCGCTCAAACGGGAATTGGTCGCGTGCCTGCGGACCGGTCGTGCGCTGCGGGTCCCGCGGGC
CAGGACACAGAACAAACCGCAGGGACATGTCACCGCGGACGTCGTGATCAGCAAACGCCCTGCCGAAGCCGCCGATCGCG
CAGTTCCTGGGCATTGGGAGGGTGATTTGATCATCGGTGCGGGCCGGTCGGCGATTGCCACCGTGGTGGAACGCAAGAGC
CGCTCGGTGATGCTGGTTCACCTTCCCCGCCTCGAGGGGTGGGGTCTGGCGCCGCCGGTGAAGAACGGGCCGGCGCTCAG
CGGCTACGGCGCCGAGGCGATGAACGCTGCCCTGATCGCCTCACTGGCACAGCTACCCAAGCAGCTGCGTCAGACGTTGA
CATGGGACCGCGGCAAAGAGTTGGCCGCGCACGCCCAGTTCACCTTCGACACCGGAACGAAGGTGTTTTTCGCCGACCCG
CACTCGCCATGGCAGCGGCCTACCAACGAGAACACCAATGGCGTTCTGCGTCAGTACTTTCCGAAAGGCACCGACTTATC
TCGATGGTCGGCTCAAGACCTCGAAGCGGTCGCACTGACGCTCAACAACCGACCCCGAAAGGTCCTCGGCTGGAAGACTC
CCGCCGAAGTCTTTGCCCAACAGCTACACTCACTCCAACAACCCGGTGTTGCAACGACCGATTGA

Protein sequence :
MAKRKDAESVGRRRQWAADRALRPAMRSPGRPDPSRSVQRQFWRLIAQGVSTDDAAAEVGVSTPVATRWFHHAGGMTPIS
LDEPTGRYLSFAEREEIALLRAQGAGVREIAREIKRDPSTVSRELRRNAATRSGTQVYRAGVAQWKAQQAAKRPKPAKLA
VNPQLREYVQQRLDGSVRGPDGTAVAGPQTKAWNGRNKPHRQDRRWSTAWSPEQIAHRLPLDFPDDESMRISHEAIYQSL
FIEGRGALKRELVACLRTGRALRVPRARTQNKPQGHVTADVVISKRPAEAADRAVPGHWEGDLIIGAGRSAIATVVERKS
RSVMLVHLPRLEGWGLAPPVKNGPALSGYGAEAMNAALIASLAQLPKQLRQTLTWDRGKELAAHAQFTFDTGTKVFFADP
HSPWQRPTNENTNGVLRQYFPKGTDLSRWSAQDLEAVALTLNNRPRKVLGWKTPAEVFAQQLHSLQQPGVATTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 4e-148 77
DIP0764 NP_939135.1 transposase Not tested Not named Protein 2e-155 76
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 7e-167 76