Gene Information

Name : Mmcs_5430 (Mmcs_5430)
Accession : YP_642586.1
Strain :
Genome accession: NC_008147
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 11965 - 13209 bp
Length : 1245 bp
Strand : -
Note : PFAM: Integrase, catalytic region; KEGG: cdi:DIP0764 putative transposase

DNA sequence :
GTGTCGACACCGGTGGCGACCAGGTGGTTCCACCACGCTGGCGGCATGACGCCGATCAGTCTGGATGAGCCCACGGGCCG
GTATCTGTCGTTCGCCGAGCGGGAGGAGATCGCACTGCTACGCGCCCAGGGCGCCGGGGTGCGTGAGATCGCCCGCGAGA
TCAAGCGTGACCCCTCGACAGTTTCGCGGGAACTGCGGCGCAACGCAGCCACCCGCAGCGGCACGCAGGTGTACCGCGCA
GGGGTGGCGCAGTGGAAGGCCCAGCAAGCAGCAAAGCGCCCGAAACCCGCGAAACTGGCAGTCAACCCGCAGCTGCGTGA
GTACGTGCAGCAGCGGCTCGATGGCAGTGTCCGCGGACCCGACGGCACCGCCGTCGCAGGTCCGCAGACCAAGGCCTGGA
ACGGCCGCAACAAGCCGCACCGACAAGACCGACGGTGGTCGACAGCATGGAGCCCGGAACAGATTGCCCACCGCTTACCG
CTGGATTTCCCCGATGATGAGTCCATGCGCATCAGCCATGAGGCGATCTATCAGTCCTTGTTCATCGAGGGGCGTGGGGC
GCTCAAACGGGAATTGGTCGCGTGCCTGCGGACCGGTCGTGCGCTGCGGGTCCCGCGGGCCAGGACACAGAACAAACCGC
AGGGACATGTCACCGCGGACGTCGTGATCAGCAAACGCCCTGCCGAAGCCGCCGATCGCGCAGTTCCTGGGCATTGGGAG
GGTGATTTGATCATCGGTGCGGGCCGGTCGGCGATTGCCACCGTGGTGGAACGCAAGAGCCGCTCGGTGATGCTGGTTCA
CCTTCCCCGCCTCGAGGGGTGGGGTCTGGCGCCGCCGGTGAAGAACGGGCCGGCGCTCAGCGGCTACGGCGCCGAGGCGA
TGAACGCTGCCCTGATCGCCTCACTGGCACAGCTACCCAAGCAGCTGCGTCAGACGTTGACATGGGACCGCGGCAAAGAG
TTGGCCGCGCACGCCCAGTTCACCTTCGACACCGGAACGAAGGTGTTTTTCGCCGACCCGCACTCGCCATGGCAGCGGCC
TACCAACGAGAACACCAATGGCGTTCTGCGTCAGTACTTTCCGAAAGGCACCGACTTATCTCGATGGTCGGCTCAAGACC
TCGAAGCGGTCGCACTGACGCTCAACAACCGACCCCGAAAGGTCCTCGGCTGGAAGACTCCCGCCGAAGTCTTTGCCCAA
CAGCTACACTCACTCCAACAACCCGGTGTTGCAACGACCGATTGA

Protein sequence :
MSTPVATRWFHHAGGMTPISLDEPTGRYLSFAEREEIALLRAQGAGVREIAREIKRDPSTVSRELRRNAATRSGTQVYRA
GVAQWKAQQAAKRPKPAKLAVNPQLREYVQQRLDGSVRGPDGTAVAGPQTKAWNGRNKPHRQDRRWSTAWSPEQIAHRLP
LDFPDDESMRISHEAIYQSLFIEGRGALKRELVACLRTGRALRVPRARTQNKPQGHVTADVVISKRPAEAADRAVPGHWE
GDLIIGAGRSAIATVVERKSRSVMLVHLPRLEGWGLAPPVKNGPALSGYGAEAMNAALIASLAQLPKQLRQTLTWDRGKE
LAAHAQFTFDTGTKVFFADPHSPWQRPTNENTNGVLRQYFPKGTDLSRWSAQDLEAVALTLNNRPRKVLGWKTPAEVFAQ
QLHSLQQPGVATTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 6e-147 77
DIP0764 NP_939135.1 transposase Not tested Not named Protein 1e-147 77
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 3e-147 77