Gene Information

Name : Mmcs_0929 (Mmcs_0929)
Accession : YP_638100.1
Strain : Mycobacterium sp. MCS
Genome accession: NC_008146
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1023727 - 1024110 bp
Length : 384 bp
Strand : +
Note : PFAM: transposase IS3/IS911; KEGG: mbo:Mb2839c probable transposase

DNA sequence :
ATGTTGGAGGCTCCTGACCTTGGAAACGAGGATGCAGGTATGCCGAAGGAACAGTCGCCTGGGAAGCCCACGACACGTCG
TTACAGCTCGGAGGAGAAGGCCGCCGCGGTGCGGATGGTCCGTACCCTGCGCGAAGAGCTGGGCACCGAGCAAGGCACGG
TCACGCGGGTGGCCCATCAACTCGGGTACGGCGTGGAATCGGTGCGCTCCTGGGTACGCCAGGCCGACATCGACGATGGC
CACGCCCCCGGGGTGACGAGCACCGAGTCCGCGAAGGTCAAAGAGCTCGAGCAAGAGATCCGAGAACTGAAGCGGGCCAA
TGAGATTCTGAAGCGAGCGGCAAGTTTCTTCGGGGCGGAGCTCGACCGCCAACACAAGAAATAG

Protein sequence :
MLEAPDLGNEDAGMPKEQSPGKPTTRRYSSEEKAAAVRMVRTLREELGTEQGTVTRVAHQLGYGVESVRSWVRQADIDDG
HAPGVTSTESAKVKELEQEIRELKRANEILKRAASFFGAELDRQHKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09023.1 unknown Not tested SHI-O Protein 2e-12 41
SF2979 NP_708753.1 IS629 ORF1 Not tested SHI-1 Protein 2e-12 41
tnpE AAD44738.1 TnpE Not tested SHI-2 Protein 2e-12 41
ECO111_3720 YP_003236060.1 putative IS629 transposase OrfA Not tested LEE Protein 9e-14 41
unnamed AAL67399.1 TnpE-like protein Not tested PAI II CFT073 Protein 2e-12 41
ECO111_3775 YP_003236110.1 putative IS629 transposase OrfA Not tested LEE Protein 9e-14 41
unnamed ADD91740.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-12 41
Z4335 NP_289560.1 hypothetical protein Not tested OI-122 Protein 9e-14 41
Z1199 NP_286734.1 hypothetical protein Not tested TAI Protein 8e-15 41
Z1222 NP_286757.1 hypothetical protein Not tested TAI Protein 8e-15 41
c5168 NP_757016.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-12 41
Z1639 NP_287142.1 hypothetical protein Not tested TAI Protein 8e-15 41
c5214 NP_757062.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-12 41
Z1661 NP_287163.1 hypothetical protein Not tested TAI Protein 8e-15 41
S3184 NP_838467.1 IS629 orfA Not tested SHI-1 Protein 2e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmcs_0929 YP_638100.1 transposase IS3/IS911 VFG0643 Protein 7e-13 41