Gene Information

Name : Mmcs_4345 (Mmcs_4345)
Accession : YP_641506.1
Strain : Mycobacterium sp. MCS
Genome accession: NC_008146
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4621660 - 4622421 bp
Length : 762 bp
Strand : +
Note : PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR; KEGG: fra:Francci3_0367 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGCCCGTTCTGGACAGATTCCGTCTCGACGACAAGGTCGTCATCGTCACCGGCGCCTCCTCGGGTCTCGGCGTGGCGTT
CGCCAAGGCCTGCGCGGAGGCCGGCGCGGACGTCGTACTGGCCGCCCGCCGCGTGGAGAAACTGGAAGGCACCGCCGAGC
TGGTGCGCGCGGCGGGACGCCGTGCGCTGTCGGTGGCCACCGACGTCGTCGACCCGGCCCAGTGCCAGGCGATGGTCGAC
GCGGCGATGGCGGAGTTCGGCCACGTCGACGTGCTGGTGAACAACGCCGGGGTGGGCACCGCCGTCCCGGCCACCCGGGA
GACTCCGGACGAATTCCGCGCCGTCGTCGACGTGAACCTCAACGGGGCGTACTGGGCGGCGCAGGCCTGCGGCCGGGTGA
TGGGCCCGGGCAGTTCGATCGTCAACATCTCGAGCATCCTCGGCATCACCACCGCCGGTCTGCCGCAGGCCGCCTACAGC
GCGAGCAAGGCGGCGATCGCCGGGTTGACGCGCGACCTGGCGCAGCAGTGGGGCATCCGCAAGGGCATCCGCGTCAACGC
GATCGCACCGGGATTCTTCGAGTCGGAGATGACCGATCAGTACAAACCCGGCTACCTCGAGAGCGTCATCGAGCGTGCGG
TGCTGGGTCGCACCGGCGACCCGGAGGAGCTCGCGGCCACGCTGGTCTGGCTGGCGTCGGACGCCGGTGGCTACGTGACC
GGGCAGACCATCGTCGTCGACGGCGGCGTCACCATCACCTAG

Protein sequence :
MPVLDRFRLDDKVVIVTGASSGLGVAFAKACAEAGADVVLAARRVEKLEGTAELVRAAGRRALSVATDVVDPAQCQAMVD
AAMAEFGHVDVLVNNAGVGTAVPATRETPDEFRAVVDVNLNGAYWAAQACGRVMGPGSSIVNISSILGITTAGLPQAAYS
ASKAAIAGLTRDLAQQWGIRKGIRVNAIAPGFFESEMTDQYKPGYLESVIERAVLGRTGDPEELAATLVWLASDAGGYVT
GQTIVVDGGVTIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 3e-16 43