|
Name : Mmcs_4037 (Mmcs_4037) Accession : YP_641198.1 Strain : Mycobacterium sp. MCS Genome accession: NC_008146 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 4308100 - 4309659 bp Length : 1560 bp Strand : + Note : PFAM: Integrase, catalytic region; KEGG: lxx:Lxx22540 transposase, ISlxx5 DNA sequence : GTGTCGTTTTCGGAGGACTGTGTCCGGTTTGGGGATCGGCTAGCGCGGTTGGTTGATGCCGGGGTGCCGGTGAAGGAGGC GGCGGTCGCTACTGGGGTTTCGCGTGACCGGTGTTATGCGATTCTGCGGGCGATCGGCCGGCCTGTCGGGCAGGCCCGTG GTCGGGGTGAGCGCGCTGATCAGCGTGGGGTGGCCGACCTGGGTGTGGTCGTGGCCGTATTCAAGGACACCGGTTCGATC CTGCAGGCGGCCACAGCGTGTGGGGTGTCGCATTCGACGGCACGCAAACTGTTGGTCGCCGAGGGGCTGGTGACCAGCGG GAAGATCCCGTGGGGCAAGCCCGAGGCGAAACGTCGGTGCTTGGAGCTGTTCGAGCAGGGTTGGTCCACCGGGGCAGCGG CGCGGGAGGTCGGTGTCAACGTGCGGACCGCGCGGGACTGGCGCAAGGGGATCCGGCACACCAACAACACGCGGGTTCAC CCCGATGGTCGGGTCGTGGACTACACCGACCGGACCGTCTACAAACAGTCGGTGAGCAACCTGATCTGCGATGACACCGG ACGGCCGGCCATCGATGACCGGTATCTGTCGGTCCAGGACCGAGTGGCGATCGCCGATGGCCTCCTCGGGAAGGAGTCGT TACGGACGATCGCCGGGCGGATCGGCAAAAACGTTTCCACGGTGTCGCGGGAGATTCGTGCGCGCAGCATTGATGGCCGC TATCTGCCGTATCACGCCGATCGGGCGGCGGCCTCGGCCCGGGCTCGGCCCAAGCAGTCCAAACTGGTGGTCAACGTGGT CCTGCGGGGAGCGGTTGAAGAAGGCCTGTCGCGCAAGCTGTCACCGGAGCAGATCTCCAATCGCCTCCGTCGGGATCATC CCGACGACGAGAGCATGCAGGTGAGCCACGAAACGATCTACCAAGCCCTCTACTTCCAGGCGCGCGGTGGCCTCAAAAAG GAAGTGCAGCAAGCACTTCGAACCGGGCGCACCCGACGCAAACCACACCGCAAAGAAGGCGAGCGCTATCAGCGCTTCAC CGACCCGATGGTGATGATCAGCGACCGCCCAGCCGAGGTGGACGACCGTGCGGTTCCCGGGCATTGGGAAGGGGATTTGA TCACCGGGGAGAAGAACCAGACCGCGATCGGCACTCTGGTCGAGCGATCGACGCGCTACACCATGCTGGTGCACCTGCCA GGCGGGCACGACGCCGAATCGGTACGGGATGCGCTAATTGCGACTATCAGCACTCTTCCGGCGCATCTGCGTGGCTCACT GACTTGGGACCAAGGCTGCGAGATGGCAGGGCACAAGCAGTTCACGATGGCCACCGATATGGCCGTGTACTTCTGCGATC CGGCCAGTCCCTGGCAGCGCGGCAGCAACGAGAACACCAACGGCCTGCTGCGCCAGTACTTCCCCAAAGGCACCGACCTG AGCATCTACGGCCCCGAGGACCTCGAACACGTCGCCCAGGAACTCAACGGCCGCCCACGCAAAACGCTCGGCTGGGATAC CCCAGCCGAGCGCCTGCGTGATCTACTACTGACCAATTAA Protein sequence : MSFSEDCVRFGDRLARLVDAGVPVKEAAVATGVSRDRCYAILRAIGRPVGQARGRGERADQRGVADLGVVVAVFKDTGSI LQAATACGVSHSTARKLLVAEGLVTSGKIPWGKPEAKRRCLELFEQGWSTGAAAREVGVNVRTARDWRKGIRHTNNTRVH PDGRVVDYTDRTVYKQSVSNLICDDTGRPAIDDRYLSVQDRVAIADGLLGKESLRTIAGRIGKNVSTVSREIRARSIDGR YLPYHADRAAASARARPKQSKLVVNVVLRGAVEEGLSRKLSPEQISNRLRRDHPDDESMQVSHETIYQALYFQARGGLKK EVQQALRTGRTRRKPHRKEGERYQRFTDPMVMISDRPAEVDDRAVPGHWEGDLITGEKNQTAIGTLVERSTRYTMLVHLP GGHDAESVRDALIATISTLPAHLRGSLTWDQGCEMAGHKQFTMATDMAVYFCDPASPWQRGSNENTNGLLRQYFPKGTDL SIYGPEDLEHVAQELNGRPRKTLGWDTPAERLRDLLLTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDC7B_2034 | YP_005163475.1 | transposase-like protein | Not tested | Not named | Protein | 7e-59 | 47 |
| DIP0764 | NP_939135.1 | transposase | Not tested | Not named | Protein | 2e-59 | 47 |
| CDC7B_2059 | YP_005163500.1 | transposase-like protein | Not tested | Not named | Protein | 4e-59 | 47 |
