Gene Information

Name : Mmcs_2248 (Mmcs_2248)
Accession : YP_639412.1
Strain : Mycobacterium sp. MCS
Genome accession: NC_008146
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2383438 - 2384406 bp
Length : 969 bp
Strand : +
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGGATTTGTGGGCGCTACTACACTGGATCAGTAGCGATTCGGAGGAGATGACAGTGGGATTCGAAGGGCAGCAGAACGG
CTCGGCTCATCAGACGGGCACCGCCCGGGTGAAGCGCGGTATGGCCGAGATGCTCAAGGGCGGCGTGATCATGGACGTCG
TCACCCCCGAGCAGGCGCGCATCGCCGAAGGCGCAGGCGCCGTCGCGGTGATGGCGCTCGAGCGGGTCCCCGCCGACATC
CGCGCCCAGGGTGGCGTGTCCCGGATGAGCGACCCCGACATGATCGAGGGCATCATCGACGCGGTCACGATCCCGGTGAT
GGCCAAGGCCCGCATCGGGCACTTCGTCGAGGCCCAGATCCTGCAGAGCCTCGGCGTGGACTACGTCGACGAGTCCGAGG
TGTTGACACCCGCCGACTACACCCACCACATCGACAAGTGGAAGTTCACCGTTCCGTTCGTGTGCGGCGCCACCAACCTG
GGCGAGGCGCTGCGGCGCATCACCGAGGGTGCGGCGATGATCCGCTCCAAGGGTGAGGCCGGCACCGGTGACGTGTCCAA
CGCCACCACCCACATGCGCAAGATTGGCGGCGAGATCCGCCGCCTGACCTCGCTGTCGGAGGACGAACTGTACGTCGCGG
CCAAGGAACTGCAGGCCCCGTACGACCTGGTGGCCGAGGTGGCGCGGGCCGGCAAGCTGCCGGTCACGCTGTTCACCGCC
GGCGGTATCGCGACCCCGGCCGACGCGGCGATGATGATGCAACTCGGCGCCGAGGGCGTATTCGTCGGATCGGGCATCTT
CAAATCCGGTAACCCCGCCGAGCGGGCCGCGGCGATCGTCAAGGCGACGACGTTCTACGACGACCCCGACGTGCTGGCCA
AGGTGTCGCGCGGACTGGGTGAGGCCATGGTCGGCATCAACGTGGAGGACATCGCCCAGCCGCACCGGCTGGCCGAGCGC
GGCTGGTAA

Protein sequence :
MDLWALLHWISSDSEEMTVGFEGQQNGSAHQTGTARVKRGMAEMLKGGVIMDVVTPEQARIAEGAGAVAVMALERVPADI
RAQGGVSRMSDPDMIEGIIDAVTIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYTHHIDKWKFTVPFVCGATNL
GEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIGGEIRRLTSLSEDELYVAAKELQAPYDLVAEVARAGKLPVTLFTA
GGIATPADAAMMMQLGAEGVFVGSGIFKSGNPAERAAAIVKATTFYDDPDVLAKVSRGLGEAMVGINVEDIAQPHRLAER
GW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-115 84
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-115 84
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-115 83