Gene Information

Name : Mmcs_1998 (Mmcs_1998)
Accession : YP_639163.1
Strain : Mycobacterium sp. MCS
Genome accession: NC_008146
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2147355 - 2148077 bp
Length : 723 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: tma:TM0352 ABC transporter, ATP-binding protein

DNA sequence : 
ATGACCGCCATCGAAGAACGCCGCGACCACGACACGACCACCTCGCCGCCACTGCCGGTCATCGAGATCGCCGACGTGTG
GAAACTGCACAAACTCGGCGACGAAGTGGTGCGCGCGCTGGTCGCCGCGGACCTGACCGTGATGCCGGGCGAGTTCGTCT
GCCTGATGGGACCGAGCGGCAGCGGAAAGTCCACGCTGCTTAACATCATCGGCGGGCTGGACCGCCCGACGAAGGGTTCG
GTGGCGGTCGCCGGGCGCGACACCCGCACGCTGACGGAAAGCCAGTTCGCCGCGTTACGCCACGACACCATCGGGTTCAT
CTTCCAGAGCTACAACCTGATCCCGTTCCTGTCGGCGGTCGAGAACGTCGAACTGCCGCTGATGTTCGAGCCCTACGATC
GCAAAGCGTTGCGCACCAGGGCCATCGAGTTGCTCGAACTGGTCGGCCTCGGCCACCGCATCCACCACCAGCCGACCAAG
ATGTCCGGCGGTGAACAGCAGCGCACGGCGATCGCGCGCTCGCTGATCAGCAGTCCGGCGCTCGTCCTCGCCGACGAGCC
CACAGCCAACCTCGACCACCGCACGGGGGAGACGGTGGTGCGCATGCTGCGCGACCTGTGTTCGACGCTGGGCGTCACGG
TCGTCGCGAGCACCCACGACCCCACGGTGGCCGACGAAGCGAGCCGTGTCGTCCGGATGAAAGACGGACAAATCGTCAAC
TGA

Protein sequence : 
MTAIEERRDHDTTTSPPLPVIEIADVWKLHKLGDEVVRALVAADLTVMPGEFVCLMGPSGSGKSTLLNIIGGLDRPTKGS
VAVAGRDTRTLTESQFAALRHDTIGFIFQSYNLIPFLSAVENVELPLMFEPYDRKALRTRAIELLELVGLGHRIHHQPTK
MSGGEQQRTAIARSLISSPALVLADEPTANLDHRTGETVVRMLRDLCSTLGVTVVASTHDPTVADEASRVVRMKDGQIVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmcs_1998 YP_639163.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-37 45
Mmcs_1998 YP_639163.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-41 43
Mmcs_1998 YP_639163.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-39 41