Gene Information

Name : Mmcs_0179 (Mmcs_0179)
Accession : YP_637356.1
Strain : Mycobacterium sp. MCS
Genome accession: NC_008146
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : R : General function prediction only
COG ID : COG4221
EC number : -
Position : 198940 - 199683 bp
Length : 744 bp
Strand : -
Note : PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: sco:SCO0522 oxidoreductase

DNA sequence :
ATGCTGGGGCACATGACTGATTCGAAGATCATCCTCGTCACCGGCGCCAGCAGCGGGATCGGCGCCGCCGTCGCCACCCA
CCTCGCCCGCGCCGGCCACCATGTCATCGCCGGCGCGCGCCGCGAGGACCGCCTGCGCGAACTCGCCGACGGCGCCGCCG
ATCTCGAGCGCGGCAGCCTGTCGGTGCGCCGGCTCGACGTCACCGACCGCGCCGAGATGGCGGCCTTCGTCGACGACGCC
GTGTCCACTCACGGCCGTCTCGATGTCCTCGTCAACAACGCCGGGATCATGCCCCTGTCGCGGCTCGACGCCCTGCTGGT
CGACCAGTGGGACGCCATGATCGACGTCAACGTCCGGGGCCTGCTCAACGGCATCGCCGCGGCGCTGCCGCACTTCCACC
GGCTCGGCGGCGGACACTTCGTGACCGTGGCCTCGATCGGCGCCCACGAGGTGGTGCCCACGTCCGCGGTGTACAGCGCC
ACCAAGTACGCCGCGTGGGCGATCACCGAGGGCCTGCGCCAGGAGTCCGACCCCTCGATCCGCGTCACGACCGTCTCCCC
CGGCGTGGTGGAGTCCGAGCTCGCGAGCACCATCACCGATCCCGGCGCCGCGGCGGCGATGCAGGAGTACCGGGCCGCCG
CGATCACACCGGACGCGATCGCCCGAGCCATCGCCTACGCGATCTCCGAACCCGAGGAGGTCGATGTCAACGAGGTGATC
GTGCGGCCGGCGCGCCAGCGCTGA

Protein sequence :
MLGHMTDSKIILVTGASSGIGAAVATHLARAGHHVIAGARREDRLRELADGAADLERGSLSVRRLDVTDRAEMAAFVDDA
VSTHGRLDVLVNNAGIMPLSRLDALLVDQWDAMIDVNVRGLLNGIAAALPHFHRLGGGHFVTVASIGAHEVVPTSAVYSA
TKYAAWAITEGLRQESDPSIRVTTVSPGVVESELASTITDPGAAAAMQEYRAAAITPDAIARAIAYAISEPEEVDVNEVI
VRPARQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC20627.1 hypothetical protein Not tested Internalin Protein 3e-29 41
adh CAI59964.1 short-chain dehydrogenase Not tested LIPI-2 Protein 8e-37 41