Gene Information

Name : Mmcs_1639 (Mmcs_1639)
Accession : YP_638805.1
Strain : Mycobacterium sp. MCS
Genome accession: NC_008146
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1777527 - 1778096 bp
Length : 570 bp
Strand : -
Note : PFAM: Integrase, catalytic region; KEGG: mbo:Mb2838c probable transposase

DNA sequence : 
ATGTCCGGTATCCGGATCTGGTGGACCGCCGGTTCTACGCGTCGGCCCCAAATCGGTTGTGGGTGGCTGACTTCACGTAT
GTGGCGACGTGGATGGGGTTCGTACGTGGCGTTCGTCATCGACGCCTACAGCCGCCGGATCGTGGGATGGCGAGCCGCTC
GGTCGATGACCACCGACCTGGTCCTCGACGCCATCGAGCACGCGTTCTTCACCCGCACCCAGGACGGCACCAGTCTGCGC
GGGCTGATCGCGCATTCGGATGCCGGCAGTCAGTACACCTCGGTGGCGTTCACCCAACGGCTCATCGACGAGGGAGTGGA
TCCGTCGGTCGGCTCGGTCGGTGACGCGCTGGACAACGCGCTGGCCGAGACCACCGTCGGGTCGTTCAAGAACGAGGTGA
TCCGCCGGCAAGGCCCGTGGCGCGACGTCAACCAGGTCGAGCTGGCCACCGCCGAGTGGGTGGTGTGGTTCAACACCGAG
CGTCCGCATGAGTACCTCGACGACTTCACCCCTGAGGCCGTCGAGAAGCTCCACTACGATCAAAAACTCACCCCACCAAA
GGCAGGGTGA

Protein sequence : 
MSGIRIWWTAGSTRRPQIGCGWLTSRMWRRGWGSYVAFVIDAYSRRIVGWRAARSMTTDLVLDAIEHAFFTRTQDGTSLR
GLIAHSDAGSQYTSVAFTQRLIDEGVDPSVGSVGDALDNALAETTVGSFKNEVIRRQGPWRDVNQVELATAEWVVWFNTE
RPHEYLDDFTPEAVEKLHYDQKLTPPKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 2e-25 48
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 6e-22 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmcs_1639 YP_638805.1 integrase catalytic subunit VFG1715 Protein 2e-22 45