Gene Information

Name : YPA_CD0025 (YPA_CD0025)
Accession : YP_636817.1
Strain :
Genome accession: NC_008122
Putative virulence/resistance : Virulence
Product : type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 20894 - 21265 bp
Length : 372 bp
Strand : +
Note : -

DNA sequence : 
GTGAGTTGGATTGAACCCATCATTTCCCATTTCTGCCAGGATCTGGGAGTGCCAACATCTAGCCCCCTTTCGCCTCTTAT
TCAATTAGAGATGGCTCAATCTGGCACGCTGCAACTGGAACAACATGGTGCGACACTGACATTGTGGTTAGCGCGTTCTC
TTGCCTGGCACCGGTGCGAAGATGCTATGGTCAAAGCGCTAACGCTCACGGCGGCCCAAAAGAGTGGCGCTTTACCGCTG
CGAGCGGGGTGGTTAGGGGAAAGTCAGCTGGTGTTATTTGTCTCGCTTGATGAGCGTTCCTTAACCTTGCCCCTTTTACA
TCAAGCTTTCGAACAGTTACTGCGATTGCAGCAAGAGGTGCTTGCGCCGTGA

Protein sequence : 
MSWIEPIISHFCQDLGVPTSSPLSPLIQLEMAQSGTLQLEQHGATLTLWLARSLAWHRCEDAMVKALTLTAAQKSGALPL
RAGWLGESQLVLFVSLDERSLTLPLLHQAFEQLLRLQQEVLAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssN AAO18047.1 LssN Virulence TTSS locus Protein 3e-32 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPA_CD0025 YP_636817.1 type III secretion protein VFG0387 Protein 2e-51 100
YPA_CD0025 YP_636817.1 type III secretion protein VFG0195 Protein 8e-26 48