Gene Information

Name : YPA_CD0009 (YPA_CD0009)
Accession : YP_636800.1
Strain :
Genome accession: NC_008122
Putative virulence/resistance : Virulence
Product : type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6117 - 6464 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATATAAACTCAACGTACTGTTAGCAGAGATTGCTCTGATTGGAACCGGCAACCACTACCACGAAGAAGCGAATTG
CATTGCTGAATGGTTACATTTGAAAGGTGAAGAAGAGGCGGTTCAATTGATTCGCCTTTCCTCTTTGATGAACCGTGGGG
ACTACGCAAGCGCCTTGCAACAAGGAAATAAATTAGCTTATCCTGATTTGGAACCTTGGTTAGCCTTATGTGAATATCGC
CTCGGGTTGGGGAGCGCCTTAGAGTCACGTTTAAATCGTCTCGCAAGGAGTCAGGATCCTAGAATACAGACATTTGTGAA
TGGAATGAGGGAGCAACTAAAAACATGA

Protein sequence : 
MKYKLNVLLAEIALIGTGNHYHEEANCIAEWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLAYPDLEPWLALCEYR
LGLGSALESRLNRLARSQDPRIQTFVNGMREQLKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscG AAO18030.1 LscG Virulence TTSS locus Protein 4e-27 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPA_CD0009 YP_636800.1 type III secretion protein VFG0406 Protein 5e-49 100
YPA_CD0009 YP_636800.1 type III secretion protein VFG0215 Protein 4e-24 54