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Name : pilB (MXAN_5788) Accession : YP_633925.1 Strain : Myxococcus xanthus DK 1622 Genome accession: NC_008095 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 7165146 - 7166846 bp Length : 1701 bp Strand : - Note : identified by match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02538 DNA sequence : ATGTCCGGTCGACTCGGTGAACTGCTGGTTCGCGAGAACCTCATCTCCGTGCAGCAGCTGCGCAAGGCCCAGGAAGAGCA GCAGAAGAACGGCACGCGCATCGGCACCGCGCTCGTCAAGACGGGCGCCATCGAGGAGTCGAAGCTGACCGACTTCCTCT CCAAGCAATATGGCGTGCCGGCCATCAACCTGAAGGACTTCGACGTCGAGCCGGACATCATCAAACTGGTGCCGAAGGAA GTGGCGGAGAAGCACCTGGTGGTGCCCGTCAACCGCGCGGGCCCGTCGCTCATCGTGGCCATGTGCGACCCGTCCAACAT CTTCGCGGTGGACGACCTGAAGTTCCTCACCGGCTACAACATCGAGACGGTGGTCGCCTCCGAGGTCTCCATCCGCGAGG CCATCGAGCGCTATTACGCGGAGAAGGGCCCGTCGCTGGAGGACATCGTCGGCGACGTCGGTGACGACATCGAGGTCACC AAGGAAGAGACGGAGAACATCGATGAGATGGCCAAGGCCGCGGACGACGCGCCCGTGGTCAAGCTGGTGAACCTCATCCT CATGGACGCCATCAAGAAGCGCGCGTCCGATATCCACGTCGAGCCCTACGAGAAGGACTTCCGCGTCCGCTTCCGCATCG ACGGTGTGATGTACGAGGTGATGCGCCCGCCGATGAAGCTGCGCAACGCGATCACCTCGCGTTTGAAGATCATGGCCTCG CTGGACATCTCCGAGCGGCGCCTGCCGCAGGACGGCCGCATCAAGATCAAGATGGGCGGCGGCAAGGAGATGGACTTCCG CGTGAGCGTGTGCCCCACGCTCTTCGGCGAGAAGGTCGTGATGCGTCTGCTCGACAAGAGCAACCTCCAGCTCGACATGA CGAAGCTGGGCTTCGACGCGCAGCCGCTGGCCTGGTTCAAGGAGGCCATCGACCGGCCCTACGGCATGGTGCTGGTGACG GGCCCCACGGGCTCGGGCAAGACGACGACGCTGTACTCGGCGCTCTCCAGCCTCAACGGCCTGGACACCAACATCTGCAC CGCGGAGGACCCGGTCGAGTTCAACTTCGCCGGCATCAATCAGGTGCAGATGCATGACGACATCGGCCTGAACTTCGCCG CGGCGCTGCGCTCCTTCCTCCGCCAGGACCCGGACATCATCATGATTGGTGAGATCCGCGACTTCGAGACGGCGGAAATC GGCGTGAAGGCGGCGCTCACGGGCCACCTGGTGCTCTCCACGCTGCACACCAACGACGCCCCGGGCACGGTGAGCCGTCT GCTCAACATGGGCATCGAGCCGTTCCTCGTGACGGCTTCGCTGAACCTCATCCTCGCCCAGCGTCTGGCGCGTCGTCTGT GCCCGGCCTGCAAGAAGCCGGCGGAGAACGTGGACGAGCAGGCGCTCATCGACGCCGGTGTTCCGCCGGACAAGATTGGC ACCTTCACGATGTACGAGAAGGTCGGCTGCCGCGACTGCAACGACCGTGGCTACCGCGGCCGCGTGGCCATCTACGAGGT CATGCCCTTCTGGGACGGCCTCAAGGAGCTGGTCATCAACGGCGCCTCCGCCGCGGAGCTGAAGCAGGAGGCCATCCGCC TGGGCATGAGCAGCCTGCGCATGAGCGGTCTTCGCAAGATGATGGACGGCGCCACCACGTTGGAAGAGGTGGTGGGAAAC ACCGCCCCGGACCGCTTCTAG Protein sequence : MSGRLGELLVRENLISVQQLRKAQEEQQKNGTRIGTALVKTGAIEESKLTDFLSKQYGVPAINLKDFDVEPDIIKLVPKE VAEKHLVVPVNRAGPSLIVAMCDPSNIFAVDDLKFLTGYNIETVVASEVSIREAIERYYAEKGPSLEDIVGDVGDDIEVT KEETENIDEMAKAADDAPVVKLVNLILMDAIKKRASDIHVEPYEKDFRVRFRIDGVMYEVMRPPMKLRNAITSRLKIMAS LDISERRLPQDGRIKIKMGGGKEMDFRVSVCPTLFGEKVVMRLLDKSNLQLDMTKLGFDAQPLAWFKEAIDRPYGMVLVT GPTGSGKTTTLYSALSSLNGLDTNICTAEDPVEFNFAGINQVQMHDDIGLNFAAALRSFLRQDPDIIMIGEIRDFETAEI GVKAALTGHLVLSTLHTNDAPGTVSRLLNMGIEPFLVTASLNLILAQRLARRLCPACKKPAENVDEQALIDAGVPPDKIG TFTMYEKVGCRDCNDRGYRGRVAIYEVMPFWDGLKELVINGASAAELKQEAIRLGMSSLRMSGLRKMMDGATTLEEVVGN TAPDRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-89 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-90 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pilB | YP_633925.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 2e-91 | 49 |
| pilB | YP_633925.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 2e-91 | 48 |
| pilB | YP_633925.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 1e-111 | 47 |
| pilB | YP_633925.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 1e-116 | 46 |
| pilB | YP_633925.1 | type IV-A pilus assembly ATPase PilB | VFG1876 | Protein | 2e-83 | 45 |
| pilB | YP_633925.1 | type IV-A pilus assembly ATPase PilB | VFG0233 | Protein | 5e-103 | 43 |
