Gene Information

Name : MXAN_5646 (MXAN_5646)
Accession : YP_633785.1
Strain : Myxococcus xanthus DK 1622
Genome accession: NC_008095
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 7014528 - 7014797 bp
Length : 270 bp
Strand : -
Note : identified by similarity to SP:P35535; match to protein family HMM PF01313

DNA sequence : 
ATGACCCAGGACGTTTTCCTCACCCTGGGACGCGAGGCCCTGCTGTTGATGGTGATGGCGTCGCTGCCACCCATTGGCGC
GAGCCTGGTGGTGGGGTTCTTGTCGAGCCTCTTCCAGGCCACCACCCAGCTTCAGGAGTCCACGTTGTCGGTGGTGCCCA
AGCTGTGCGCGGCCGTCCTGGCACTGGTCCTCGCCGGACCCTGGATTGCCGGGCAGCTCACGCGTTTCACCCACCAGCTC
CTGATGCTCATCTCCGAGGTCGCGGCATGA

Protein sequence : 
MTQDVFLTLGREALLLMVMASLPPIGASLVVGFLSSLFQATTQLQESTLSVVPKLCAAVLALVLAGPWIAGQLTRFTHQL
LMLISEVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 2e-04 45
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 2e-04 45
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 2e-04 45
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 4e-04 42
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 4e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MXAN_5646 YP_633785.1 type III secretion system protein VFG0043 Protein 0.003 49
MXAN_5646 YP_633785.1 type III secretion system protein VFG1260 Protein 2e-05 44