Gene Information

Name : MXAN_5313 (MXAN_5313)
Accession : YP_633464.1
Strain : Myxococcus xanthus DK 1622
Genome accession: NC_008095
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6615375 - 6616055 bp
Length : 681 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGTCCACGCGCGTCCTGCTCATCGACGACGACACCCGGATGTATGAACTGCTCGAGCAGTACCTCGGGCAGAACGGCCT
CAGCGTCACCCACGCGGCGGATGGCGGACGGGGGCTGGCGGCGCTGGAGGCCAGTGCCTTCGACGCGGTGCTGCTCGACG
TGATGATGCCCGGCATGGACGGCCTGGAGGTCTGCAAGCGCATCCGCGCCAAGAGCCGCATCCCCGTCATCATGCTCACC
GCGAAGGGCGACGAGACGGACCGCGTGGTGGGCTTGGAGCTGGGCGCGGACGACTACCTCCCCAAGCCCTTCAGTCCCCG
AGAGCTGCTGGCGCGGCTGCGGGCCGTACTCCGCCGCTCGCAGCCCTCGGCGGTGGCGGACCGGCTAGAGTCGGGCGGCG
TGTCCATCGACGTGGCCGGGCGCGAGGTACGCGTGGAGGAGCGCGCCGTGGAGTTGACGGGCCTGGAGTTCGATTTACTC
GTCGCGCTGGTGCGCAGGGCCGGACGCGTCGTTCCGCGCGACGCCCTGCTGGGCGAGGCGGGCCGCAGTGACACGGTGGT
GGGCGAGCGCACCGTCGACGTGCACATCTCCCACCTGCGACAGAAGCTCGGTGACGTGGGCACCCGCCTCATCAAGACGG
TGCGCGGCGTGGGCTACGTGTTCGCCAAGGAGGGTCCGTGA

Protein sequence : 
MSTRVLLIDDDTRMYELLEQYLGQNGLSVTHAADGGRGLAALEASAFDAVLLDVMMPGMDGLEVCKRIRAKSRIPVIMLT
AKGDETDRVVGLELGADDYLPKPFSPRELLARLRAVLRRSQPSAVADRLESGGVSIDVAGREVRVEERAVELTGLEFDLL
VALVRRAGRVVPRDALLGEAGRSDTVVGERTVDVHISHLRQKLGDVGTRLIKTVRGVGYVFAKEGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MXAN_5313 YP_633464.1 DNA-binding response regulator CP000675.2.gene1535. Protein 3e-30 48
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 6e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 5e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 6e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 4e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 5e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 5e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 5e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 5e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 5e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 5e-28 47
MXAN_5313 YP_633464.1 DNA-binding response regulator BAC0125 Protein 4e-23 46
MXAN_5313 YP_633464.1 DNA-binding response regulator CP001485.1.gene721.p Protein 1e-26 45
MXAN_5313 YP_633464.1 DNA-binding response regulator BAC0533 Protein 7e-19 45
MXAN_5313 YP_633464.1 DNA-binding response regulator CP000647.1.gene4257. Protein 7e-19 45
MXAN_5313 YP_633464.1 DNA-binding response regulator CP001138.1.gene4273. Protein 8e-19 45
MXAN_5313 YP_633464.1 DNA-binding response regulator CP001918.1.gene5135. Protein 5e-16 45
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_002695.1.915041.p Protein 8e-19 44
MXAN_5313 YP_633464.1 DNA-binding response regulator CP000034.1.gene3834. Protein 8e-19 44
MXAN_5313 YP_633464.1 DNA-binding response regulator CP004022.1.gene3215. Protein 1e-22 44
MXAN_5313 YP_633464.1 DNA-binding response regulator AE000516.2.gene3505. Protein 2e-25 44
MXAN_5313 YP_633464.1 DNA-binding response regulator AE016830.1.gene1681. Protein 4e-25 43
MXAN_5313 YP_633464.1 DNA-binding response regulator NC_012469.1.7686381. Protein 3e-28 42
MXAN_5313 YP_633464.1 DNA-binding response regulator HE999704.1.gene2815. Protein 1e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MXAN_5313 YP_633464.1 DNA-binding response regulator VFG1390 Protein 3e-21 43
MXAN_5313 YP_633464.1 DNA-binding response regulator VFG1563 Protein 7e-24 41