Gene Information

Name : MXAN_5040 (MXAN_5040)
Accession : YP_633195.1
Strain : Myxococcus xanthus DK 1622
Genome accession: NC_008095
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 6300904 - 6302424 bp
Length : 1521 bp
Strand : -
Note : identified by match to protein family HMM PF00171

DNA sequence :
GTGATCTACGCCGCCCCCAATCAGCCCGGCTCCAAGGTGCAGTTCAAGCCCCGCTACCAGAACTTCATTGGCGGGCGCTG
GGTCGAACCCACGCGTGGTCAGTACTTCGAGAACATCAGCCCCGTGACGGGCAAGCCCTTCTGTGAAGTGGCCCGCTCCA
CGGCCGAGGACATCGAGAAGGCGCTGGATGCGGCCCACGCGGCCCGGCTCTCCTGGGGCCGCACCTCGCCGACCGCCCGA
GCGAACATCCTCAACAAGATCGCCGACCGGATGGAGCAGAACCGGGAGATGCTCGCGGTCGCCGAGACGTGGGACAACGG
CAAGCCCGTGCGTGAGACGCTGGCCGCGGACATCCCGCTGGCCATCGACCACTTCCGTTATTTCGCCGGGTGTATCCGCG
CGCAGGAAGGCGGGGTGAGCGAGCTGGACCACGACACCGTCGCCTACCACTTCCATGAGCCGCTGGGCGTCGTGGGGCAG
ATCATCCCCTGGAACTTCCCGCTCCTGATGGCGGCCTGGAAGCTGGCCCCGGCGCTGGCGGCGGGCAACTGCGTGGTCCT
CAAGCCCGCGGAGCAGACGCCCTCCAGCATCCTGCTGTGGACCGAGCTCATCCAGGACCTGCTGCCCGAAGGTGTGCTCA
ACGTCGTCAACGGCTTCGGCGTCGAGGCGGGCAAGCCGCTGGCCAGCAGCCCGCGCATCGCGAAGGTGGCCTTCACCGGC
GAGACGAGCACGGGCCGGCTCATCATGCAGTACGCCAGTGAGAACCTCATCCCCGTCACGCTGGAACTGGGCGGCAAGAG
CCCCAACATCTTCTTCGAGGATGTGATGGCGCAGGACGACGACTTCTTCGACAAGTCGTTGGAAGGCTTCGCCATGTTCG
CGCTCAACCAGGGCGAGGTCTGCACCTGCCCGTCGCGCTCCCTCATCAGCGAGCGCATCTACAGCCAGTTCATGGAGAAG
GCGCTCGACCGCGTCCGCAAGGTGAAGCCGGGCAACCCGCTGGACACCGACACCATGGTCGGCGCCCAGGCGTCCAACGA
CCAGTTGGAGAAGATCCTCAGCTACATCGACATCGGCAAGAAGGAGGGCGCCAAGGTCCTCATCGGCGGCGAGCGCGTGG
CGCTGTCCGGGGACCTGAAGGACGGCTACTACGTGGCGCCCACCGTGTTCCAGGGCCACAACCGCATGCGCGTCTTCCAG
GAGGAGATTTTCGGCCCCGTGGTGAGCGTGGCGACCTTCAAGGACTTCGACGACGCCATCCGCCAGGCCAACGACACACT
GTACGGCCTGGGCGCCGGCGTGTGGACGCGTGACGGGAACACCGCCTACCGCGCGGGGCGCGCCATCGAGGCTGGCCGCG
TGTGGACCAACTGCTACCACATCTACCCCGCGCACGCGGCGTTCGGCGGCTACAAGCAGTCCGGCATCGGGCGGGAGAAC
CACCGGAAGATGCTGGACCACTACCAGCAGACGAAGAACCTGCTGGTCAGCTACAGCCCCAAGGCCATGGGCTTCTTCTG
A

Protein sequence :
MIYAAPNQPGSKVQFKPRYQNFIGGRWVEPTRGQYFENISPVTGKPFCEVARSTAEDIEKALDAAHAARLSWGRTSPTAR
ANILNKIADRMEQNREMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGGVSELDHDTVAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPSSILLWTELIQDLLPEGVLNVVNGFGVEAGKPLASSPRIAKVAFTG
ETSTGRLIMQYASENLIPVTLELGGKSPNIFFEDVMAQDDDFFDKSLEGFAMFALNQGEVCTCPSRSLISERIYSQFMEK
ALDRVRKVKPGNPLDTDTMVGAQASNDQLEKILSYIDIGKKEGAKVLIGGERVALSGDLKDGYYVAPTVFQGHNRMRVFQ
EEIFGPVVSVATFKDFDDAIRQANDTLYGLGAGVWTRDGNTAYRAGRAIEAGRVWTNCYHIYPAHAAFGGYKQSGIGREN
HRKMLDHYQQTKNLLVSYSPKAMGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-140 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-150 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-150 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-150 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-149 62
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 1e-64 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MXAN_5040 YP_633195.1 aldehyde dehydrogenase VFG0082 Protein 6e-141 63