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Name : lysS (MXAN_4731) Accession : YP_632893.1 Strain : Myxococcus xanthus DK 1622 Genome accession: NC_008095 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 5926999 - 5928552 bp Length : 1554 bp Strand : - Note : identified by similarity to SP:P14825; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499 DNA sequence : ATGGCCGAGACCGAAAACAAGAGCGAGAAGAGTGCGGGCGAGGGCGACCTCGGGACGAAGGAACAGGAAATCTACGACCA GCGGCTGGAGAAGGCCGCGAAGTGGCGCGAGGCCGGCTTCAATCCGTACGGCAACGGCTACCGTCCCCAGCACCAGGCCG CCGAAATCCACGAGAAGCACGCCGCTCAGTCCGCCGAGGAAATCGAGCAGGCCGCGCCTCCGCCCTATGACGTCGCCGGC CGCGTCGTGGCCATGCGCTCCTTCGGCAAGGCCGCCTTCATCAAGCTGCGCGACCGCTCGGGCGAAATCCAGGTCCACAT GAAGAAGGACGCCTTGGGGGACTCCTATGAGACCTTCAAGCTCTGTGACTTGGGCGACTTCCTGGCCGCCACCGGTCCGG TGTTCCGTTCGAAGACGGGCGAGCTCACGCTCTCCGCCACGAAGTTCACCCCGCTCACCAAGTCCCTGCGCCCCCTGCCG GAGAAGTGGCACGGCCTGACGGACGTGGAGGTCCGCTACCGTCAGCGGTACCTGGACCTCGTGTCCAACCCGGACGTGAA GCAGACCTTCCTCCGGCGCAACAAGCTCATCCGCTTCATCCGGAACTTCCTCGACACGCGTGACTTCGTCGAGGTCGAAA CGCCGATGATGCACCCGCTCGTGTCCGGCGCGGCGGCGCGGCCCTTCACCACGCACCACAACGCGCTCGACATTGACCTG TACATGCGCATCGCCCCGGAGCTGTATCTCAAGCGCCTGGTGGTGGGCGGCCTGGAGCGCGTCTACGAGGTCAACCGCAA CTTCCGCAATGAAGGCATCAGCACCCGGCACAACCCGGAATTCACGATGCTGGAGTTCTATCAGGCGTACGCCACGTACG AGGACCTGATGGACCTCTCCGAGGAGATGATTTCGGAGGCCGCCAAGGCCGTCACCGGCGACACGAAGGTGAAGTACGGC GACCACGTGCTCGACTTCGGCAAGGGCTGGAAGCGCATCTCCATGACGGAGGCCATCCGCGAGGTGGTGAGCGGCCTGTC CGACAAGGACATGGCGGACGCGGACCGGCTGCGCCACGAACTGCTCAAGACGAGCCACTCGGAGGCCGAGCGGCGGGCCA TCGACACGATGAACCACGGTGAGCTGGTGGGCGCGCTCTTCGAGCACCACGTCGAGCACACGCTCATCCATCCCACCTTC ATCACCCATTTCCCCACCGCCGTCTCGCCGCTGGCCCGGCGCAATGACCAGAACCCGGACGTGACGGACCGCTTCGAGCT GTACGTGGCGGGCCGCGAAATCGCGAACGCCTTCTCCGAGCTGAACGACCCGCTGGACCAGAAGGGCCGCTTCCAGGCTC AGCTGGACGCGAAGCAGCGGGGCCAGCAGGAGACCATGGACTACGACGAGGACTACATCCGGGCCCTCGAGCACGGCATG CCGCCCACCGCCGGTGAAGGCATCGGGATTGATCGGCTCGCCATGCTGTTCACGGATTCGCAGAGCATCCGGGACGTCAT CCTGTTTCCCCTCCTCAAGCCACTGGCGAAGTAG Protein sequence : MAETENKSEKSAGEGDLGTKEQEIYDQRLEKAAKWREAGFNPYGNGYRPQHQAAEIHEKHAAQSAEEIEQAAPPPYDVAG RVVAMRSFGKAAFIKLRDRSGEIQVHMKKDALGDSYETFKLCDLGDFLAATGPVFRSKTGELTLSATKFTPLTKSLRPLP EKWHGLTDVEVRYRQRYLDLVSNPDVKQTFLRRNKLIRFIRNFLDTRDFVEVETPMMHPLVSGAAARPFTTHHNALDIDL YMRIAPELYLKRLVVGGLERVYEVNRNFRNEGISTRHNPEFTMLEFYQAYATYEDLMDLSEEMISEAAKAVTGDTKVKYG DHVLDFGKGWKRISMTEAIREVVSGLSDKDMADADRLRHELLKTSHSEAERRAIDTMNHGELVGALFEHHVEHTLIHPTF ITHFPTAVSPLARRNDQNPDVTDRFELYVAGREIANAFSELNDPLDQKGRFQAQLDAKQRGQQETMDYDEDYIRALEHGM PPTAGEGIGIDRLAMLFTDSQSIRDVILFPLLKPLAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-107 | 47 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 5e-81 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_632893.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 7e-108 | 47 |
