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Name : gspE (MXAN_2513) Accession : YP_630732.1 Strain : Myxococcus xanthus DK 1622 Genome accession: NC_008095 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2921231 - 2923048 bp Length : 1818 bp Strand : - Note : identified by match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02533 DNA sequence : ATGAACCTGACCGCCGACCCCGCCCTCACCAGCGCCGCCACCGGAGGCACGGTTTCCCCGCGCAACGACGCCACGCAGCT CGTGGCACACGGACAGGCCTACCTGTGTGGCCGCCCGCTGGGGGAAATCCTGCGCGCCATCGTCCCCTCGCTCACCGAGG AGAAGCTCCAGGAGGCGCTCGCCATCCAGGACGAGAAGGGGCAGCGCATTGGCGAGGCCCTCGTGGGGATGAAGGCGGTC TCCGAGGAGGACGTGGCCAAGGCCCTGGGGCACCAGTTGGACCTGCCCTACCTGGCGCGCATCTTCGCCGAAGAGGTGGA CGCGGAGCTCGTCAAGCGCATCCCCATCAACTTCGCCAAGCAGTCACGCATCCTCCCGCTGTCCCTGGAGGGTGACACGG TGGCGGTGGCGGTGGCGGACCCGCTGGACACCGCCGCGCTGGACCACGTGCGTGTGCTGCTGGGCCAGAGCGTCAGCCAG CGCATCGCGCTGGGCTCCACCATCACCGACGCCATCAACAGCGTCTACGACCGCTCCGTCAACGAGACGGAACAGCTCGT GGACGAGATGGAAACGCAGGACCTGGACGCCATCGCCCACGAGCTGGACGAGCCCAAGGACCTGCTCGACGAGGACGACG AGGCGCCCGTCATCCGGCTGGTGAACTCCGTGCTGTTCCGCGCCGCCAAGGAGCGCGCCAGCGATATCCACATCGAGCCG ATGGAGCGCGAGCTGCTGGTGCGCTTCCGCGTGGACGGTGTGCTGCAGGAGGTCATCAAGCCGCCCAAGCGCTACCAGAA CGCCATCGTCAGCCGCGTGAAGGTCATGGGGCAGCTCAACATCGCGGAGAAGCGCCTGCCGCAGGACGGCCGCATCCGCA TCAAGCTGGCCGGCCGCGACATCGACATCCGTCTGTCCACCATCCCCACGTCCTTCGGCGAGCGCATCGTCATGCGTCTG CTGGACAAGACGGCGACGCTGCTGGACCTGGCGGAAATCGGCATGAGCCAGAAGACGCTCGAGTCGATGGAAGCCGTCAT CAAACGCTCGCACGGCATCATCCTGGTGACGGGCCCCACGGGCTCCGGCAAGACGACGACGCTCTACGGCGCCCTGTCGA AAATCAATACGCCCGACCTCAACATCCTCACCGTCGAGGACCCGGTCGAATACCAGCTCAAGGGCATTGGCCAGATGGCC ATCAGCCCGAAGATTGGGCTGACGTTCGCGCAGGGGCTGCGCTCCTTCCTCCGCCAGGACCCGGACGTCATCATGGTCGG CGAGATTCGCGACAAGGAGACGGCGGAAATCGCCATCCAGGCCTCGCTGACGGGCCACCTGGTGCTGTCCACCGTCCACA CCAACGACGCCGCCGGCGCCGTGACACGTCTGGTGGACATGGGCGTGGAGCCCTTCCTCGTGGCGTCCTCGCTCACCGGC ATCCTGGCCCAGCGGCTGGTGCGCCGCGTGTGCCCGGACTGCCGCGTGCCCTTCGAGCCCACCGACGCGGAGCTCAAGGA GCTGGGCCACTCGGTGGCCTCCTTCAAGCAGCGCTACGGCGTGGACCGCATCTACAAGGCCTCCGGTTGCCCCTCCTGCA ACCGCAACGGCTACCGCGGGCGAACCGGCATCTACGAGTTCCTCCCCGTGGATGACGACGTGCGCCAGCTCGTGCTGAAG AACGTGGACGCCTCCACCATCAAGCGGTCCGCCACGTCCAAGGGCATGACGACGCTGCTGGATGACGGCGCGCGGAAGAT TGCCCTGGGCGAGACGACCATCGCCGAGGTGCTCAGCATCACCCAGGAGGACATGTAG Protein sequence : MNLTADPALTSAATGGTVSPRNDATQLVAHGQAYLCGRPLGEILRAIVPSLTEEKLQEALAIQDEKGQRIGEALVGMKAV SEEDVAKALGHQLDLPYLARIFAEEVDAELVKRIPINFAKQSRILPLSLEGDTVAVAVADPLDTAALDHVRVLLGQSVSQ RIALGSTITDAINSVYDRSVNETEQLVDEMETQDLDAIAHELDEPKDLLDEDDEAPVIRLVNSVLFRAAKERASDIHIEP MERELLVRFRVDGVLQEVIKPPKRYQNAIVSRVKVMGQLNIAEKRLPQDGRIRIKLAGRDIDIRLSTIPTSFGERIVMRL LDKTATLLDLAEIGMSQKTLESMEAVIKRSHGIILVTGPTGSGKTTTLYGALSKINTPDLNILTVEDPVEYQLKGIGQMA ISPKIGLTFAQGLRSFLRQDPDVIMVGEIRDKETAEIAIQASLTGHLVLSTVHTNDAAGAVTRLVDMGVEPFLVASSLTG ILAQRLVRRVCPDCRVPFEPTDAELKELGHSVASFKQRYGVDRIYKASGCPSCNRNGYRGRTGIYEFLPVDDDVRQLVLK NVDASTIKRSATSKGMTTLLDDGARKIALGETTIAEVLSITQEDM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 5e-100 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-100 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspE | YP_630732.1 | general secretory pathway protein E | VFG0182 | Protein | 9e-106 | 49 |
| gspE | YP_630732.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-102 | 47 |
| gspE | YP_630732.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-94 | 45 |
| gspE | YP_630732.1 | general secretory pathway protein E | VFG0112 | Protein | 2e-83 | 41 |
