Gene Information

Name : MXAN_2447 (MXAN_2447)
Accession : YP_630667.1
Strain : Myxococcus xanthus DK 1622
Genome accession: NC_008095
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4790
EC number : -
Position : 2854581 - 2855276 bp
Length : 696 bp
Strand : +
Note : identified by match to protein family HMM PF00813; match to protein family HMM TIGR01102

DNA sequence : 
GTGGTCAACGAGGCTGTCAACAGCGACTCGTTCGCCTCGCGCCCGCTCATCCTCATCCTGGCGCTCGCGGCCATGGGCCT
GGTGCCCTTCGCGCTGATGATGGCGACCAGCTTCGTGAAGATTTCGGTGGTGCTCTCCATCGTCCGCTCGGCGCTGGGCA
CGCAGCAGATTCCGCCCACCCAGGTCATCACCGGCCTGGCCATCATCCTCACCGTCTACATCATGGCCCCGGTGGGCCAG
CAGATGTACCGCGCGGCCGGCCTGGACATCTGGGCCAAGGGCCCCGGCGTGTTCTCCTCGGAGACGGTGGGCTCGATGCT
GGGCGCCGCCAACAAGTCCAAGGAGCCGCTGCGCGAGTGGCTCATCAAGAAGGTCACCACCAAGGACCGGGCGCTCTTCT
TCAACCTCGCCAAGAAGATGCGCAAGGGCGAGGACCGCGACGCCGTGGAGAGCAATGACTTCATGGTCATCATCCCGGCC
TTCGTGGTGTCCGAACTCAAGGAGGCCTTCCAGATAGGCTTCCTCTTGTTCGTGCCGTTCATCGTCATCGACATGGTGGT
GGCCAACATCCTGCTGGCGCTCGGCATGCACATGTTGTCGCCGACCACCATCTCCATGCCGTTCAAGCTGCTGCTGTTCG
TGCTCGTGGACGGCTGGTATCTCATCGCCAAGGGCCTGGTCGTCGGCTACCTGTAG

Protein sequence : 
MVNEAVNSDSFASRPLILILALAAMGLVPFALMMATSFVKISVVLSIVRSALGTQQIPPTQVITGLAIILTVYIMAPVGQ
QMYRAAGLDIWAKGPGVFSSETVGSMLGAANKSKEPLREWLIKKVTTKDRALFFNLAKKMRKGEDRDAVESNDFMVIIPA
FVVSELKEAFQIGFLLFVPFIVIDMVVANILLALGMHMLSPTTISMPFKLLLFVLVDGWYLIAKGLVVGYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 8e-41 44
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 8e-41 44
lscR AAO18040.1 LscR Virulence TTSS locus Protein 7e-39 44
hrcR AAP34349.1 HrcR Virulence Hrp PAI Protein 2e-40 43
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-36 43
hrcR NP_640757.1 type III secretion system protein Virulence Hrp PAI Protein 2e-40 43
hrcR YP_362153.1 type III secretion system protein Virulence Hrp PAI Protein 2e-40 43
hrcR AAD21321.1 HrcR Virulence Hrp PAI Protein 2e-40 43
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-31 43
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-31 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-33 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-33 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-33 42
hrcR BAB07862.1 HrcR Virulence Hrp PAI Protein 2e-40 42
hrcR YP_198720.1 type III secretion system protein Virulence Hrp PAI Protein 2e-40 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 1e-34 41
escR AAC38369.1 EscR Virulence LEE Protein 4e-32 41
escR AAK26700.1 EscR Virulence LEE Protein 1e-32 41
escR AAL57527.1 EscR Virulence LEE Protein 1e-32 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 4e-32 41
escR CAC81847.1 EscR protein Virulence LEE II Protein 1e-32 41
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 1e-32 41
escR CAI43889.1 EscR protein Virulence LEE Protein 1e-32 41
escR AAC31528.1 L0049 Virulence LEE Protein 9e-33 41
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 1e-32 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 9e-33 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 1e-32 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MXAN_2447 YP_630667.1 type III secretion system protein VFG0044 Protein 1e-43 46
MXAN_2447 YP_630667.1 type III secretion system protein VFG0394 Protein 7e-37 46
MXAN_2447 YP_630667.1 type III secretion system protein VFG2338 Protein 9e-37 45
MXAN_2447 YP_630667.1 type III secretion system protein VFG0188 Protein 1e-40 44
MXAN_2447 YP_630667.1 type III secretion system protein VFG2494 Protein 7e-36 43
MXAN_2447 YP_630667.1 type III secretion system protein VFG1259 Protein 8e-35 42
MXAN_2447 YP_630667.1 type III secretion system protein VFG0827 Protein 5e-33 41
MXAN_2447 YP_630667.1 type III secretion system protein VFG0715 Protein 2e-32 41
MXAN_2447 YP_630667.1 type III secretion system protein VFG2016 Protein 4e-32 41