Gene Information

Name : rph (MXAN_2004)
Accession : YP_630239.1
Strain : Myxococcus xanthus DK 1622
Genome accession: NC_008095
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2336758 - 2337471 bp
Length : 714 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
GTGCGTTCCTTTCAACGTGGTGCGCTAGACCTTCGCCCCGTCGTCCTCACCCCCGGTGTCTCCCGCTACGCGGAGGGCTC
GGTGCAGGTGGAGTTCGGCCACACCAAGGTGCTCGTCACCTGCTCCACGGAGGAGCGCGTTCCGCCGCACCTGATGGGCA
AGGGCTCCGGCTGGGTGACGGCGGAGTACGGCATGCTGCCGCGCGCCACGCACTCGCGGAACCAGCGTGAGTCCGCCAAG
GGCAAGCAGACGGGCCGCACCATGGAAATCCAGCGGCTCATCGGCCGCTCCCTGCGCGCCGCGGTGGACCTGTCCACCCT
GGGGCCTCGCACCCTGACGCTGGACTGTGACGTGCTCCAGGCGGACGGTGGCACCCGCACCGCTTCCATCACCGGGGCCT
ACGTGGCGCTGGTGCTGGCGCTGCGCTCGCTGCAGAAGGCCGGAACCATCTCCAAGCTGCCCAAGCTCACGCCGTTGGCG
GCCGTGTCCGTGGGCATCGTCAAGGGCGAGGTCCGGGTGGACCTGGACTACGACGAGGACTCCACCGCGGATGTGGACCT
GAACCTGGTGGCCACCGCGGACGGCCGCATGGTGGAGCTGCAGGGCACGGCGGAGCACCAGCTCTTCGACCGCAAGGCCC
TGGACGCCATGGTGGATGGCGGGCTGGCCGCCATCCAGAAGCTGACGGCCGCGCAGGCGCAGGTGCTGGGATGA

Protein sequence :
MRSFQRGALDLRPVVLTPGVSRYAEGSVQVEFGHTKVLVTCSTEERVPPHLMGKGSGWVTAEYGMLPRATHSRNQRESAK
GKQTGRTMEIQRLIGRSLRAAVDLSTLGPRTLTLDCDVLQADGGTRTASITGAYVALVLALRSLQKAGTISKLPKLTPLA
AVSVGIVKGEVRVDLDYDEDSTADVDLNLVATADGRMVELQGTAEHQLFDRKALDAMVDGGLAAIQKLTAAQAQVLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-48 54