Gene Information

Name : MXAN_1349 (MXAN_1349)
Accession : YP_629606.1
Strain : Myxococcus xanthus DK 1622
Genome accession: NC_008095
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1583035 - 1583733 bp
Length : 699 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGAGCGACAAGACGCGGAGCATCCTGGTCGTGGAGGACGACCTGTCCATCCTCACGGGCCTGTCCATGAACCTGCGCTT
CGAGGGCTACGAGGTGCTCCAGGCCCAGGATGGCCGCACCGGCCTGGCGCGCGCGCTGGACGAGTCGCCAGACCTGGTGG
TGCTGGACGTCATGCTGCCGGAGCTCAATGGCTTCGAGGTCCTCAAGGAGCTGCGCCAGCGCGGCCGGGACACGCCCGTC
GTCGTGCTCTCCGCCAAGGGCATGGAGACGGACAAGATTGTCGGCCTCAACCTGGGCGCGGACGACTACGTGGTGAAGCC
GTTCGGCCTCCAGGAGCTGCTGGCCCGAATCAAGGCCGTGCTGCGCCGGCGCTACCCCTCCGCGGGGGCGGGTTCGCCGC
CGCCGGTGACCTTCGGCGACGTGAGCGTGGACATGGCCGCCCGCACGGTGGCACGCGCGAGGACGCCGGTGGAGCTCACC
GCGCAGGAGTTCAAGCTGCTGGCGCACTTCCTCGCGCACCCTGGACGCACCTTCACCCGCGAGGAGCTGCTGTCCGGCGC
GTGGGGCTACCACTACGAAGGCAGCGCCCGCACCGTGGACAACTTCATGCGCCAGCTGCGCCTGAAGTTCGAGCCCGACC
CGGAAGCCCCCCGCCACTTCCTCACCGTGCGCGGACTGGGCTACCGCTTCGAGCGCTGA

Protein sequence : 
MSDKTRSILVVEDDLSILTGLSMNLRFEGYEVLQAQDGRTGLARALDESPDLVVLDVMLPELNGFEVLKELRQRGRDTPV
VVLSAKGMETDKIVGLNLGADDYVVKPFGLQELLARIKAVLRRRYPSAGAGSPPPVTFGDVSVDMAARTVARARTPVELT
AQEFKLLAHFLAHPGRTFTREELLSGAWGYHYEGSARTVDNFMRQLRLKFEPDPEAPRHFLTVRGLGYRFER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MXAN_1349 YP_629606.1 DNA-binding response regulator HE999704.1.gene2815. Protein 8e-42 44
MXAN_1349 YP_629606.1 DNA-binding response regulator AE016830.1.gene1681. Protein 2e-45 44
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_012469.1.7685629. Protein 2e-40 44
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_002952.2859905.p0 Protein 8e-40 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_012469.1.7686381. Protein 2e-36 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_002758.1121668.p0 Protein 1e-39 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_009641.5332272.p0 Protein 1e-39 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_013450.8614421.p0 Protein 1e-39 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_007793.3914279.p0 Protein 1e-39 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_007622.3794472.p0 Protein 9e-40 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_002745.1124361.p0 Protein 1e-39 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_009782.5559369.p0 Protein 1e-39 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_002951.3237708.p0 Protein 1e-39 42
MXAN_1349 YP_629606.1 DNA-binding response regulator NC_003923.1003749.p0 Protein 1e-39 42
MXAN_1349 YP_629606.1 DNA-binding response regulator CP001485.1.gene721.p Protein 2e-34 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MXAN_1349 YP_629606.1 DNA-binding response regulator VFG1390 Protein 1e-37 43
MXAN_1349 YP_629606.1 DNA-binding response regulator VFG1389 Protein 3e-36 42
MXAN_1349 YP_629606.1 DNA-binding response regulator VFG1702 Protein 5e-37 41