Gene Information

Name : MXAN_1239 (MXAN_1239)
Accession : YP_629498.1
Strain : Myxococcus xanthus DK 1622
Genome accession: NC_008095
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1576
EC number : -
Position : 1452360 - 1452824 bp
Length : 465 bp
Strand : -
Note : identified by match to protein family HMM PF02590

DNA sequence :
GTGAAGGTCCGGCTCCTCTCCATCGGCAAGGACCGCTCGGGCCTGTATGAGCCCGCGGTCCAGGAGTACGCCAAGCGCCT
GGGCCACTACACCCGCTTCGAGTTGGTGGAGATGGCGGAGGCCAGCGGCAAGCGGCTCAAGCCCGGCGACGCGAAGGCCG
CCGAAGCCGAGGCGATTCTCTCCAAGCGCAAGCCGCAGGACTGGCTGGTGGCCCTGGACGAGCGCGGCTCACTGCTCGAC
TCCGTCGAGCTGAGCCGCTACGTCGGCAAGGCGCAGACGGGCGCCAAGGACCTGCTGTTCATCATTGGCGGGGACGAAGG
GCTCGACGCGCGCGTGCGGGACGCGGCGAACCTCACGCTGTCCCTGTCGAAGATGACGCTGCCTCACCGGCTGGCGCGCG
TGGTGCTCATCGAACAGCTCTACCGCGCGTTCACCATCCTCAAGGGCGAGCCGTACCACAAGTAG

Protein sequence :
MKVRLLSIGKDRSGLYEPAVQEYAKRLGHYTRFELVEMAEASGKRLKPGDAKAAEAEAILSKRKPQDWLVALDERGSLLD
SVELSRYVGKAQTGAKDLLFIIGGDEGLDARVRDAANLTLSLSKMTLPHRLARVVLIEQLYRAFTILKGEPYHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC57492.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 8e-27 41
unnamed BAB72121.1 hypothetical protein Not tested Type-IVa SCCmec Protein 8e-27 41
unnamed BAB72138.1 open reading frame X Not tested Type-IVb SCCmec Protein 8e-27 41
unnamed BAC67575.1 open reading frame X Not tested Type-IVc SCCmec Protein 8e-27 41
SAR0024 YP_039501.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-26 41
unnamed BAA82243.1 orfX Not tested Type-II SCCmec Protein 8e-27 41
SAV0024 NP_370548.1 rRNA large subunit methyltransferase Not tested Type-II SCCmec Protein 1e-26 41
unnamed BAD24821.1 conserved hypothetical protein orfX Not tested Type-V SCCmec Protein 8e-27 41
orfX BAA86653.1 open reading frame X Not tested Type-I SCCmec Protein 8e-27 41
unnamed BAG06184.1 conserved hypothetical protein orfX Not tested Type-VII SCCmec Protein 8e-27 41
unnamed BAB47681.1 open reading frame X Not tested Type-III SCCmec Protein 8e-27 41
unnamed BAC53844.1 open reading frame X Not tested SRImec-III and SCCmec-III region Protein 8e-27 41