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Name : kdsB (MXAN_1100) Accession : YP_629360.1 Strain : Myxococcus xanthus DK 1622 Genome accession: NC_008095 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 1281228 - 1281968 bp Length : 741 bp Strand : - Note : identified by similarity to SP:P42216; match to protein family HMM PF02348; match to protein family HMM TIGR00466 DNA sequence : ATGCAATCTTGCCGGACCGTTGCAGTCATTCCCGCCCGACATGCCAGCACCCGCTTCCCGGGCAAGCCGCTGGCAATCAT CGCCGGCCGAACAATGATTGAGCACGTCTGGCGCCGCTGTCAGGAGGCCCAGGCCTTCGACGAGGTGTGGGTTGCCACCG ATGACGACCGCATTCGCGCCGCAGTGGAGGGCTTTGGCGGCAAGGCGGTGATGACCAGCCCCGCCTGCGCCACGGGGACG GACCGGGTCGCCGAGGTGGCGCTCGGCCGTCCAGACATCGACATCTGGGTGAACGTCCAGGGAGACGAGCCCCTGGTGGA CCCCGCCACGCTCCAGCGGCTGGCGGGCCTCTTCCAGGACGCGTCCGTGCGGATGGGCACCCTGGTCCGCCCGCTCGAAG CGGACGAAGCCGCCAGCCCGCACGTGGTGAAGGCGGTGCTCGCGCTCAACGGCGACGCGCTCTACTTCAGCCGCAGCCTG GTACCCCACGTCCGCGAGCCGGGCACGCCCGTCCAGCGCTGGGGCCACATCGGCCTCTACGGCTACCGGCGCGAGGTGCT GCTGTCGCTGGCGAAGCTGGCGCCCACGCCGCTGGAGGACGCGGAGAAGCTGGAGCAGCTCCGCGCGCTGGAGCACGGCA TCCCCATCCGCTGCGCGAAGGTCACCTCGCACACGGTGGCCGTCGACCTCCCCGGTGACGTGGAGAAGGTGGAGGCCCTC ATGCGCGCGCGGGGGGGCTGA Protein sequence : MQSCRTVAVIPARHASTRFPGKPLAIIAGRTMIEHVWRRCQEAQAFDEVWVATDDDRIRAAVEGFGGKAVMTSPACATGT DRVAEVALGRPDIDIWVNVQGDEPLVDPATLQRLAGLFQDASVRMGTLVRPLEADEAASPHVVKAVLALNGDALYFSRSL VPHVREPGTPVQRWGHIGLYGYRREVLLSLAKLAPTPLEDAEKLEQLRALEHGIPIRCAKVTSHTVAVDLPGDVEKVEAL MRARGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 3e-45 | 45 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 4e-45 | 45 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 5e-45 | 45 |
| unnamed | AAK15335.1 | unknown | Not tested | Not named | Protein | 2e-30 | 41 |
